Gene : Medtr4g033460 M. truncatula Mt4.0v1
Defline:  (1 of 59) PTHR11165 - SKP1 Description:  SCF ubiquitin ligase, SKP1 component
Genomic Order:  1536 Name:  ? Medtr4g033460
Secondary Identifier:  ? PAC:31113935
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g033460 0.5kb upstream 0.5kb upstream 1643 true chr4: 11931829-11933471 Medicago truncatula
Medtr4g033460 0.5kb upstream 0.5kb upstream 500 false chr4: 11932972-11933471 Medicago truncatula
Medtr4g033460 0.5kb downstream 0.5kb downstream 1643 true chr4: 11931329-11932971 Medicago truncatula
Medtr4g033460 0.5kb downstream 0.5kb downstream 500 false chr4: 11931329-11931828 Medicago truncatula
Medtr4g033460 1.0kb upstream 1.0kb upstream 2143 true chr4: 11931829-11933971 Medicago truncatula
Medtr4g033460 1.0kb upstream 1.0kb upstream 1000 false chr4: 11932972-11933971 Medicago truncatula
Medtr4g033460 1.0kb downstream 1.0kb downstream 2143 true chr4: 11930829-11932971 Medicago truncatula
Medtr4g033460 1.0kb downstream 1.0kb downstream 1000 false chr4: 11930829-11931828 Medicago truncatula
Medtr4g033460 2.0kb upstream 2.0kb upstream 3143 true chr4: 11931829-11934971 Medicago truncatula
Medtr4g033460 2.0kb upstream 2.0kb upstream 2000 false chr4: 11932972-11934971 Medicago truncatula
Medtr4g033460 2.0kb downstream 2.0kb downstream 3143 true chr4: 11929829-11932971 Medicago truncatula
Medtr4g033460 2.0kb downstream 2.0kb downstream 2000 false chr4: 11929829-11931828 Medicago truncatula
Medtr4g033460 5.0kb upstream 5.0kb upstream 6143 true chr4: 11931829-11937971 Medicago truncatula
Medtr4g033460 5.0kb upstream 5.0kb upstream 5000 false chr4: 11932972-11937971 Medicago truncatula
Medtr4g033460 5.0kb downstream 5.0kb downstream 6143 true chr4: 11926829-11932971 Medicago truncatula
Medtr4g033460 5.0kb downstream 5.0kb downstream 5000 false chr4: 11926829-11931828 Medicago truncatula
Medtr4g033460 10.0kb upstream 10.0kb upstream 11143 true chr4: 11931829-11942971 Medicago truncatula
Medtr4g033460 10.0kb upstream 10.0kb upstream 10000 false chr4: 11932972-11942971 Medicago truncatula
Medtr4g033460 10.0kb downstream 10.0kb downstream 11143 true chr4: 11921829-11932971 Medicago truncatula
Medtr4g033460 10.0kb downstream 10.0kb downstream 10000 false chr4: 11921829-11931828 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029816 5273 Angiosperm View MSA
122315229 5265 Fabidae View MSA
124075211 5270 Rosid View MSA
123757626 5271 Pentapetalae View MSA
122798327 5272 Eudicot View MSA
121299090 5274 Embryophyte View MSA
123337010 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain