Gene : Medtr4g033295 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR16223:SF29 - TRANSCRIPTION FACTOR BHLH117-RELATED Description:  transcription factor
Genomic Order:  1503 Name:  ? Medtr4g033295
Secondary Identifier:  ? PAC:31111145
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g033295 0.5kb upstream 0.5kb upstream 4251 true chr4: 11664851-11669101 Medicago truncatula
Medtr4g033295 0.5kb upstream 0.5kb upstream 500 false chr4: 11668602-11669101 Medicago truncatula
Medtr4g033295 0.5kb downstream 0.5kb downstream 4251 true chr4: 11664351-11668601 Medicago truncatula
Medtr4g033295 0.5kb downstream 0.5kb downstream 500 false chr4: 11664351-11664850 Medicago truncatula
Medtr4g033295 1.0kb upstream 1.0kb upstream 4751 true chr4: 11664851-11669601 Medicago truncatula
Medtr4g033295 1.0kb upstream 1.0kb upstream 1000 false chr4: 11668602-11669601 Medicago truncatula
Medtr4g033295 1.0kb downstream 1.0kb downstream 4751 true chr4: 11663851-11668601 Medicago truncatula
Medtr4g033295 1.0kb downstream 1.0kb downstream 1000 false chr4: 11663851-11664850 Medicago truncatula
Medtr4g033295 2.0kb upstream 2.0kb upstream 5751 true chr4: 11664851-11670601 Medicago truncatula
Medtr4g033295 2.0kb upstream 2.0kb upstream 2000 false chr4: 11668602-11670601 Medicago truncatula
Medtr4g033295 2.0kb downstream 2.0kb downstream 5751 true chr4: 11662851-11668601 Medicago truncatula
Medtr4g033295 2.0kb downstream 2.0kb downstream 2000 false chr4: 11662851-11664850 Medicago truncatula
Medtr4g033295 5.0kb upstream 5.0kb upstream 8751 true chr4: 11664851-11673601 Medicago truncatula
Medtr4g033295 5.0kb upstream 5.0kb upstream 5000 false chr4: 11668602-11673601 Medicago truncatula
Medtr4g033295 5.0kb downstream 5.0kb downstream 8751 true chr4: 11659851-11668601 Medicago truncatula
Medtr4g033295 5.0kb downstream 5.0kb downstream 5000 false chr4: 11659851-11664850 Medicago truncatula
Medtr4g033295 10.0kb upstream 10.0kb upstream 13751 true chr4: 11664851-11678601 Medicago truncatula
Medtr4g033295 10.0kb upstream 10.0kb upstream 10000 false chr4: 11668602-11678601 Medicago truncatula
Medtr4g033295 10.0kb downstream 10.0kb downstream 13751 true chr4: 11654851-11668601 Medicago truncatula
Medtr4g033295 10.0kb downstream 10.0kb downstream 10000 false chr4: 11654851-11664850 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299888 5265 Fabidae View MSA
124073706 5270 Rosid View MSA
123751595 5271 Pentapetalae View MSA
122793357 5272 Eudicot View MSA
122051356 5273 Angiosperm View MSA
121349754 5274 Embryophyte View MSA
123381429 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.17       High
cufflinks 4.013        
cufflinks 4.673        
cufflinks 2.982        
cufflinks 3.447        
cufflinks 2.261       Low
cufflinks 6.71       High
cufflinks 4.514        
cufflinks 3.26        

0 Strain