Gene : Medtr4g033230 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23241:SF50 - LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN-RELATED Description:  late embryogenesis abundant protein (LEA) family protein
Genomic Order:  1496 Name:  ? Medtr4g033230
Secondary Identifier:  ? PAC:31109528
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g033230 0.5kb upstream 0.5kb upstream 3125 true chr4: 11590692-11593816 Medicago truncatula
Medtr4g033230 0.5kb upstream 0.5kb upstream 500 false chr4: 11593317-11593816 Medicago truncatula
Medtr4g033230 0.5kb downstream 0.5kb downstream 3125 true chr4: 11590192-11593316 Medicago truncatula
Medtr4g033230 0.5kb downstream 0.5kb downstream 500 false chr4: 11590192-11590691 Medicago truncatula
Medtr4g033230 1.0kb upstream 1.0kb upstream 3625 true chr4: 11590692-11594316 Medicago truncatula
Medtr4g033230 1.0kb upstream 1.0kb upstream 1000 false chr4: 11593317-11594316 Medicago truncatula
Medtr4g033230 1.0kb downstream 1.0kb downstream 3625 true chr4: 11589692-11593316 Medicago truncatula
Medtr4g033230 1.0kb downstream 1.0kb downstream 1000 false chr4: 11589692-11590691 Medicago truncatula
Medtr4g033230 2.0kb upstream 2.0kb upstream 4625 true chr4: 11590692-11595316 Medicago truncatula
Medtr4g033230 2.0kb upstream 2.0kb upstream 2000 false chr4: 11593317-11595316 Medicago truncatula
Medtr4g033230 2.0kb downstream 2.0kb downstream 4625 true chr4: 11588692-11593316 Medicago truncatula
Medtr4g033230 2.0kb downstream 2.0kb downstream 2000 false chr4: 11588692-11590691 Medicago truncatula
Medtr4g033230 5.0kb upstream 5.0kb upstream 7625 true chr4: 11590692-11598316 Medicago truncatula
Medtr4g033230 5.0kb upstream 5.0kb upstream 5000 false chr4: 11593317-11598316 Medicago truncatula
Medtr4g033230 5.0kb downstream 5.0kb downstream 7625 true chr4: 11585692-11593316 Medicago truncatula
Medtr4g033230 5.0kb downstream 5.0kb downstream 5000 false chr4: 11585692-11590691 Medicago truncatula
Medtr4g033230 10.0kb upstream 10.0kb upstream 12625 true chr4: 11590692-11603316 Medicago truncatula
Medtr4g033230 10.0kb upstream 10.0kb upstream 10000 false chr4: 11593317-11603316 Medicago truncatula
Medtr4g033230 10.0kb downstream 10.0kb downstream 12625 true chr4: 11580692-11593316 Medicago truncatula
Medtr4g033230 10.0kb downstream 10.0kb downstream 10000 false chr4: 11580692-11590691 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310946 5265 Fabidae View MSA
124072864 5270 Rosid View MSA
123741808 5271 Pentapetalae View MSA
122794616 5272 Eudicot View MSA
122045721 5273 Angiosperm View MSA
121349691 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.048     Low  
cufflinks 0.044     Low  
cufflinks 0.111       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.092        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.103        
cufflinks 0.014     Low Low

0 Strain