Gene : Medtr4g033215 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10024:SF197 - C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN Description:  calcium-dependent lipid-binding (CaLB domain) family protein
Genomic Order:  1494 Name:  ? Medtr4g033215
Secondary Identifier:  ? PAC:31106319
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g033215 0.5kb upstream 0.5kb upstream 3635 true chr4: 11576414-11580048 Medicago truncatula
Medtr4g033215 0.5kb upstream 0.5kb upstream 500 false chr4: 11579549-11580048 Medicago truncatula
Medtr4g033215 0.5kb downstream 0.5kb downstream 3635 true chr4: 11575914-11579548 Medicago truncatula
Medtr4g033215 0.5kb downstream 0.5kb downstream 500 false chr4: 11575914-11576413 Medicago truncatula
Medtr4g033215 1.0kb upstream 1.0kb upstream 4135 true chr4: 11576414-11580548 Medicago truncatula
Medtr4g033215 1.0kb upstream 1.0kb upstream 1000 false chr4: 11579549-11580548 Medicago truncatula
Medtr4g033215 1.0kb downstream 1.0kb downstream 4135 true chr4: 11575414-11579548 Medicago truncatula
Medtr4g033215 1.0kb downstream 1.0kb downstream 1000 false chr4: 11575414-11576413 Medicago truncatula
Medtr4g033215 2.0kb upstream 2.0kb upstream 5135 true chr4: 11576414-11581548 Medicago truncatula
Medtr4g033215 2.0kb upstream 2.0kb upstream 2000 false chr4: 11579549-11581548 Medicago truncatula
Medtr4g033215 2.0kb downstream 2.0kb downstream 5135 true chr4: 11574414-11579548 Medicago truncatula
Medtr4g033215 2.0kb downstream 2.0kb downstream 2000 false chr4: 11574414-11576413 Medicago truncatula
Medtr4g033215 5.0kb upstream 5.0kb upstream 8135 true chr4: 11576414-11584548 Medicago truncatula
Medtr4g033215 5.0kb upstream 5.0kb upstream 5000 false chr4: 11579549-11584548 Medicago truncatula
Medtr4g033215 5.0kb downstream 5.0kb downstream 8135 true chr4: 11571414-11579548 Medicago truncatula
Medtr4g033215 5.0kb downstream 5.0kb downstream 5000 false chr4: 11571414-11576413 Medicago truncatula
Medtr4g033215 10.0kb upstream 10.0kb upstream 13135 true chr4: 11576414-11589548 Medicago truncatula
Medtr4g033215 10.0kb upstream 10.0kb upstream 10000 false chr4: 11579549-11589548 Medicago truncatula
Medtr4g033215 10.0kb downstream 10.0kb downstream 13135 true chr4: 11566414-11579548 Medicago truncatula
Medtr4g033215 10.0kb downstream 10.0kb downstream 10000 false chr4: 11566414-11576413 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026435 5273 Angiosperm View MSA
122301302 5265 Fabidae View MSA
124063760 5270 Rosid View MSA
123752822 5271 Pentapetalae View MSA
122787154 5272 Eudicot View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.031     High  
cufflinks 46.773     High  
cufflinks 75.597     High High
cufflinks 6.007       Low
cufflinks 56.111     High  
cufflinks 8.108       Low
cufflinks 13.453     High  
cufflinks 69.943     High High
cufflinks 7.644       Low

0 Strain