Gene : Medtr4g012060 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR33057:SF29 - F18B13.4 PROTEIN Description:  ovate transcriptional repressor
Genomic Order:  427 Name:  ? Medtr4g012060
Secondary Identifier:  ? PAC:31114330
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g012060 0.5kb upstream 0.5kb upstream 1636 true chr4: 3235415-3237050 Medicago truncatula
Medtr4g012060 0.5kb upstream 0.5kb upstream 500 false chr4: 3236551-3237050 Medicago truncatula
Medtr4g012060 0.5kb downstream 0.5kb downstream 1636 true chr4: 3234915-3236550 Medicago truncatula
Medtr4g012060 0.5kb downstream 0.5kb downstream 500 false chr4: 3234915-3235414 Medicago truncatula
Medtr4g012060 1.0kb upstream 1.0kb upstream 2136 true chr4: 3235415-3237550 Medicago truncatula
Medtr4g012060 1.0kb upstream 1.0kb upstream 1000 false chr4: 3236551-3237550 Medicago truncatula
Medtr4g012060 1.0kb downstream 1.0kb downstream 2136 true chr4: 3234415-3236550 Medicago truncatula
Medtr4g012060 1.0kb downstream 1.0kb downstream 1000 false chr4: 3234415-3235414 Medicago truncatula
Medtr4g012060 2.0kb upstream 2.0kb upstream 3136 true chr4: 3235415-3238550 Medicago truncatula
Medtr4g012060 2.0kb upstream 2.0kb upstream 2000 false chr4: 3236551-3238550 Medicago truncatula
Medtr4g012060 2.0kb downstream 2.0kb downstream 3136 true chr4: 3233415-3236550 Medicago truncatula
Medtr4g012060 2.0kb downstream 2.0kb downstream 2000 false chr4: 3233415-3235414 Medicago truncatula
Medtr4g012060 5.0kb upstream 5.0kb upstream 6136 true chr4: 3235415-3241550 Medicago truncatula
Medtr4g012060 5.0kb upstream 5.0kb upstream 5000 false chr4: 3236551-3241550 Medicago truncatula
Medtr4g012060 5.0kb downstream 5.0kb downstream 6136 true chr4: 3230415-3236550 Medicago truncatula
Medtr4g012060 5.0kb downstream 5.0kb downstream 5000 false chr4: 3230415-3235414 Medicago truncatula
Medtr4g012060 10.0kb upstream 10.0kb upstream 11136 true chr4: 3235415-3246550 Medicago truncatula
Medtr4g012060 10.0kb upstream 10.0kb upstream 10000 false chr4: 3236551-3246550 Medicago truncatula
Medtr4g012060 10.0kb downstream 10.0kb downstream 11136 true chr4: 3225415-3236550 Medicago truncatula
Medtr4g012060 10.0kb downstream 10.0kb downstream 10000 false chr4: 3225415-3235414 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312775 5265 Fabidae View MSA
124060845 5270 Rosid View MSA
123737715 5271 Pentapetalae View MSA
122789903 5272 Eudicot View MSA
122050605 5273 Angiosperm View MSA
121312020 5274 Embryophyte View MSA
123349235 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.28       Low
cufflinks 0.601        
cufflinks 0.574        
cufflinks 0.311       Low
cufflinks 1.109        
cufflinks 0.323       Low
cufflinks 0.927        
cufflinks 0.728        
cufflinks 1.607       High

0 Strain