Gene : Medtr4g011960 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR33510:SF6 - PROTEIN TIC 20-I, CHLOROPLASTIC Description:  Tic20 family import component
Genomic Order:  420 Name:  ? Medtr4g011960
Secondary Identifier:  ? PAC:31110968
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g011960 0.5kb upstream 0.5kb upstream 3603 true chr4: 3153354-3156956 Medicago truncatula
Medtr4g011960 0.5kb upstream 0.5kb upstream 500 false chr4: 3156457-3156956 Medicago truncatula
Medtr4g011960 0.5kb downstream 0.5kb downstream 3603 true chr4: 3152854-3156456 Medicago truncatula
Medtr4g011960 0.5kb downstream 0.5kb downstream 500 false chr4: 3152854-3153353 Medicago truncatula
Medtr4g011960 1.0kb upstream 1.0kb upstream 4103 true chr4: 3153354-3157456 Medicago truncatula
Medtr4g011960 1.0kb upstream 1.0kb upstream 1000 false chr4: 3156457-3157456 Medicago truncatula
Medtr4g011960 1.0kb downstream 1.0kb downstream 4103 true chr4: 3152354-3156456 Medicago truncatula
Medtr4g011960 1.0kb downstream 1.0kb downstream 1000 false chr4: 3152354-3153353 Medicago truncatula
Medtr4g011960 2.0kb upstream 2.0kb upstream 5103 true chr4: 3153354-3158456 Medicago truncatula
Medtr4g011960 2.0kb upstream 2.0kb upstream 2000 false chr4: 3156457-3158456 Medicago truncatula
Medtr4g011960 2.0kb downstream 2.0kb downstream 5103 true chr4: 3151354-3156456 Medicago truncatula
Medtr4g011960 2.0kb downstream 2.0kb downstream 2000 false chr4: 3151354-3153353 Medicago truncatula
Medtr4g011960 5.0kb upstream 5.0kb upstream 8103 true chr4: 3153354-3161456 Medicago truncatula
Medtr4g011960 5.0kb upstream 5.0kb upstream 5000 false chr4: 3156457-3161456 Medicago truncatula
Medtr4g011960 5.0kb downstream 5.0kb downstream 8103 true chr4: 3148354-3156456 Medicago truncatula
Medtr4g011960 5.0kb downstream 5.0kb downstream 5000 false chr4: 3148354-3153353 Medicago truncatula
Medtr4g011960 10.0kb upstream 10.0kb upstream 13103 true chr4: 3153354-3166456 Medicago truncatula
Medtr4g011960 10.0kb upstream 10.0kb upstream 10000 false chr4: 3156457-3166456 Medicago truncatula
Medtr4g011960 10.0kb downstream 10.0kb downstream 13103 true chr4: 3143354-3156456 Medicago truncatula
Medtr4g011960 10.0kb downstream 10.0kb downstream 10000 false chr4: 3143354-3153353 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301693 5265 Fabidae View MSA
124062125 5270 Rosid View MSA
123738974 5271 Pentapetalae View MSA
122790107 5272 Eudicot View MSA
122051187 5273 Angiosperm View MSA
121344668 5274 Embryophyte View MSA
123427529 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.001       Low
cufflinks 11.305     High  
cufflinks 11.18     High  
cufflinks 2.654        
cufflinks 15.966     High High
cufflinks 1.083       Low
cufflinks 2.125        
cufflinks 12.882     High High
cufflinks 1.891        

0 Strain