Gene : Medtr4g013235 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12902:SF12 - PROTEIN SCAR2-RELATED Description:  SCAR2, putative
Genomic Order:  485 Name:  ? Medtr4g013235
Secondary Identifier:  ? PAC:31112743
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g013235 0.5kb upstream 0.5kb upstream 8722 true chr4: 3624243-3632964 Medicago truncatula
Medtr4g013235 0.5kb upstream 0.5kb upstream 500 false chr4: 3624243-3624742 Medicago truncatula
Medtr4g013235 0.5kb downstream 0.5kb downstream 8722 true chr4: 3624743-3633464 Medicago truncatula
Medtr4g013235 0.5kb downstream 0.5kb downstream 500 false chr4: 3632965-3633464 Medicago truncatula
Medtr4g013235 1.0kb upstream 1.0kb upstream 9222 true chr4: 3623743-3632964 Medicago truncatula
Medtr4g013235 1.0kb upstream 1.0kb upstream 1000 false chr4: 3623743-3624742 Medicago truncatula
Medtr4g013235 1.0kb downstream 1.0kb downstream 9222 true chr4: 3624743-3633964 Medicago truncatula
Medtr4g013235 1.0kb downstream 1.0kb downstream 1000 false chr4: 3632965-3633964 Medicago truncatula
Medtr4g013235 2.0kb upstream 2.0kb upstream 10222 true chr4: 3622743-3632964 Medicago truncatula
Medtr4g013235 2.0kb upstream 2.0kb upstream 2000 false chr4: 3622743-3624742 Medicago truncatula
Medtr4g013235 2.0kb downstream 2.0kb downstream 10222 true chr4: 3624743-3634964 Medicago truncatula
Medtr4g013235 2.0kb downstream 2.0kb downstream 2000 false chr4: 3632965-3634964 Medicago truncatula
Medtr4g013235 5.0kb upstream 5.0kb upstream 13222 true chr4: 3619743-3632964 Medicago truncatula
Medtr4g013235 5.0kb upstream 5.0kb upstream 5000 false chr4: 3619743-3624742 Medicago truncatula
Medtr4g013235 5.0kb downstream 5.0kb downstream 13222 true chr4: 3624743-3637964 Medicago truncatula
Medtr4g013235 5.0kb downstream 5.0kb downstream 5000 false chr4: 3632965-3637964 Medicago truncatula
Medtr4g013235 10.0kb upstream 10.0kb upstream 18222 true chr4: 3614743-3632964 Medicago truncatula
Medtr4g013235 10.0kb upstream 10.0kb upstream 10000 false chr4: 3614743-3624742 Medicago truncatula
Medtr4g013235 10.0kb downstream 10.0kb downstream 18222 true chr4: 3624743-3642964 Medicago truncatula
Medtr4g013235 10.0kb downstream 10.0kb downstream 10000 false chr4: 3632965-3642964 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313394 5265 Fabidae View MSA
124065878 5270 Rosid View MSA
123743804 5271 Pentapetalae View MSA
122797754 5272 Eudicot View MSA
122043443 5273 Angiosperm View MSA
121351143 5274 Embryophyte View MSA
123382024 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.693        
cufflinks 5.206       High
cufflinks 3.857        
cufflinks 0.645       Low
cufflinks 4.262        
cufflinks 0.898       Low
cufflinks 2.384        
cufflinks 3.383        
cufflinks 2.627        

0 Strain