Gene : Medtr4g014790 M. truncatula Mt4.0v1
Defline:  (1 of 603) PF07127 - Late nodulin protein (Nodulin_late) Description:  Nodule Cysteine-Rich (NCR) secreted peptide
Genomic Order:  571 Name:  ? Medtr4g014790
Secondary Identifier:  ? PAC:31106827
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g014790 0.5kb upstream 0.5kb upstream 889 true chr4: 4226526-4227414 Medicago truncatula
Medtr4g014790 0.5kb upstream 0.5kb upstream 500 false chr4: 4226915-4227414 Medicago truncatula
Medtr4g014790 0.5kb downstream 0.5kb downstream 889 true chr4: 4226026-4226914 Medicago truncatula
Medtr4g014790 0.5kb downstream 0.5kb downstream 500 false chr4: 4226026-4226525 Medicago truncatula
Medtr4g014790 1.0kb upstream 1.0kb upstream 1389 true chr4: 4226526-4227914 Medicago truncatula
Medtr4g014790 1.0kb upstream 1.0kb upstream 1000 false chr4: 4226915-4227914 Medicago truncatula
Medtr4g014790 1.0kb downstream 1.0kb downstream 1389 true chr4: 4225526-4226914 Medicago truncatula
Medtr4g014790 1.0kb downstream 1.0kb downstream 1000 false chr4: 4225526-4226525 Medicago truncatula
Medtr4g014790 2.0kb upstream 2.0kb upstream 2389 true chr4: 4226526-4228914 Medicago truncatula
Medtr4g014790 2.0kb upstream 2.0kb upstream 2000 false chr4: 4226915-4228914 Medicago truncatula
Medtr4g014790 2.0kb downstream 2.0kb downstream 2389 true chr4: 4224526-4226914 Medicago truncatula
Medtr4g014790 2.0kb downstream 2.0kb downstream 2000 false chr4: 4224526-4226525 Medicago truncatula
Medtr4g014790 5.0kb upstream 5.0kb upstream 5389 true chr4: 4226526-4231914 Medicago truncatula
Medtr4g014790 5.0kb upstream 5.0kb upstream 5000 false chr4: 4226915-4231914 Medicago truncatula
Medtr4g014790 5.0kb downstream 5.0kb downstream 5389 true chr4: 4221526-4226914 Medicago truncatula
Medtr4g014790 5.0kb downstream 5.0kb downstream 5000 false chr4: 4221526-4226525 Medicago truncatula
Medtr4g014790 10.0kb upstream 10.0kb upstream 10389 true chr4: 4226526-4236914 Medicago truncatula
Medtr4g014790 10.0kb upstream 10.0kb upstream 10000 false chr4: 4226915-4236914 Medicago truncatula
Medtr4g014790 10.0kb downstream 10.0kb downstream 10389 true chr4: 4216526-4226914 Medicago truncatula
Medtr4g014790 10.0kb downstream 10.0kb downstream 10000 false chr4: 4216526-4226525 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121623531 5273 Angiosperm Singleton cluster - no MSA
122261272 5265 Fabidae Singleton cluster - no MSA
124002604 5270 Rosid Singleton cluster - no MSA
123576772 5271 Pentapetalae Singleton cluster - no MSA
122611484 5272 Eudicot Singleton cluster - no MSA
120895635 5274 Embryophyte Singleton cluster - no MSA
122936290 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.953     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.077     Low  

0 Strain