Gene : Medtr4g015540 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR34550:SF1 - 30S RIBOSOMAL PROTEIN S31, CHLOROPLASTIC Description:  hypothetical protein
Genomic Order:  620 Name:  ? Medtr4g015540
Secondary Identifier:  ? PAC:31108061
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g015540 0.5kb upstream 0.5kb upstream 2574 true chr4: 4658078-4660651 Medicago truncatula
Medtr4g015540 0.5kb upstream 0.5kb upstream 500 false chr4: 4658078-4658577 Medicago truncatula
Medtr4g015540 0.5kb downstream 0.5kb downstream 2574 true chr4: 4658578-4661151 Medicago truncatula
Medtr4g015540 0.5kb downstream 0.5kb downstream 500 false chr4: 4660652-4661151 Medicago truncatula
Medtr4g015540 1.0kb upstream 1.0kb upstream 3074 true chr4: 4657578-4660651 Medicago truncatula
Medtr4g015540 1.0kb upstream 1.0kb upstream 1000 false chr4: 4657578-4658577 Medicago truncatula
Medtr4g015540 1.0kb downstream 1.0kb downstream 3074 true chr4: 4658578-4661651 Medicago truncatula
Medtr4g015540 1.0kb downstream 1.0kb downstream 1000 false chr4: 4660652-4661651 Medicago truncatula
Medtr4g015540 2.0kb upstream 2.0kb upstream 4074 true chr4: 4656578-4660651 Medicago truncatula
Medtr4g015540 2.0kb upstream 2.0kb upstream 2000 false chr4: 4656578-4658577 Medicago truncatula
Medtr4g015540 2.0kb downstream 2.0kb downstream 4074 true chr4: 4658578-4662651 Medicago truncatula
Medtr4g015540 2.0kb downstream 2.0kb downstream 2000 false chr4: 4660652-4662651 Medicago truncatula
Medtr4g015540 5.0kb upstream 5.0kb upstream 7074 true chr4: 4653578-4660651 Medicago truncatula
Medtr4g015540 5.0kb upstream 5.0kb upstream 5000 false chr4: 4653578-4658577 Medicago truncatula
Medtr4g015540 5.0kb downstream 5.0kb downstream 7074 true chr4: 4658578-4665651 Medicago truncatula
Medtr4g015540 5.0kb downstream 5.0kb downstream 5000 false chr4: 4660652-4665651 Medicago truncatula
Medtr4g015540 10.0kb upstream 10.0kb upstream 12074 true chr4: 4648578-4660651 Medicago truncatula
Medtr4g015540 10.0kb upstream 10.0kb upstream 10000 false chr4: 4648578-4658577 Medicago truncatula
Medtr4g015540 10.0kb downstream 10.0kb downstream 12074 true chr4: 4658578-4670651 Medicago truncatula
Medtr4g015540 10.0kb downstream 10.0kb downstream 10000 false chr4: 4660652-4670651 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307820 5265 Fabidae View MSA
124067793 5270 Rosid View MSA
123752888 5271 Pentapetalae View MSA
122792825 5272 Eudicot View MSA
122046754 5273 Angiosperm View MSA
121345882 5274 Embryophyte View MSA
123380282 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.054       Low
cufflinks 59.003     High High
cufflinks 41.603     High  
cufflinks 6.056        
cufflinks 59.283     High High
cufflinks 3.698        
cufflinks 1.802       Low
cufflinks 59.001     High High
cufflinks 4.375        

0 Strain