Gene : Medtr4g015570 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED Description:  light-harvesting complex I chlorophyll A/B-binding protein
Genomic Order:  622 Name:  ? Medtr4g015570
Secondary Identifier:  ? PAC:31111565
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g015570 0.5kb upstream 0.5kb upstream 3148 true chr4: 4671256-4674403 Medicago truncatula
Medtr4g015570 0.5kb upstream 0.5kb upstream 500 false chr4: 4673904-4674403 Medicago truncatula
Medtr4g015570 0.5kb downstream 0.5kb downstream 3148 true chr4: 4670756-4673903 Medicago truncatula
Medtr4g015570 0.5kb downstream 0.5kb downstream 500 false chr4: 4670756-4671255 Medicago truncatula
Medtr4g015570 1.0kb upstream 1.0kb upstream 3648 true chr4: 4671256-4674903 Medicago truncatula
Medtr4g015570 1.0kb upstream 1.0kb upstream 1000 false chr4: 4673904-4674903 Medicago truncatula
Medtr4g015570 1.0kb downstream 1.0kb downstream 3648 true chr4: 4670256-4673903 Medicago truncatula
Medtr4g015570 1.0kb downstream 1.0kb downstream 1000 false chr4: 4670256-4671255 Medicago truncatula
Medtr4g015570 2.0kb upstream 2.0kb upstream 4648 true chr4: 4671256-4675903 Medicago truncatula
Medtr4g015570 2.0kb upstream 2.0kb upstream 2000 false chr4: 4673904-4675903 Medicago truncatula
Medtr4g015570 2.0kb downstream 2.0kb downstream 4648 true chr4: 4669256-4673903 Medicago truncatula
Medtr4g015570 2.0kb downstream 2.0kb downstream 2000 false chr4: 4669256-4671255 Medicago truncatula
Medtr4g015570 5.0kb upstream 5.0kb upstream 7648 true chr4: 4671256-4678903 Medicago truncatula
Medtr4g015570 5.0kb upstream 5.0kb upstream 5000 false chr4: 4673904-4678903 Medicago truncatula
Medtr4g015570 5.0kb downstream 5.0kb downstream 7648 true chr4: 4666256-4673903 Medicago truncatula
Medtr4g015570 5.0kb downstream 5.0kb downstream 5000 false chr4: 4666256-4671255 Medicago truncatula
Medtr4g015570 10.0kb upstream 10.0kb upstream 12648 true chr4: 4671256-4683903 Medicago truncatula
Medtr4g015570 10.0kb upstream 10.0kb upstream 10000 false chr4: 4673904-4683903 Medicago truncatula
Medtr4g015570 10.0kb downstream 10.0kb downstream 12648 true chr4: 4661256-4673903 Medicago truncatula
Medtr4g015570 10.0kb downstream 10.0kb downstream 10000 false chr4: 4661256-4671255 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306293 5265 Fabidae View MSA
124062500 5270 Rosid View MSA
123736418 5271 Pentapetalae View MSA
122792192 5272 Eudicot View MSA
122044716 5273 Angiosperm View MSA
121345249 5274 Embryophyte View MSA
123428168 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.206        
cufflinks 1102.797     High  
cufflinks 582.043     High  
cufflinks 0.178       Low
cufflinks 1283.11     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.244        
cufflinks 949.381     High  
cufflinks 0.505        

0 Strain