Gene : Medtr4g015840 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR24078:SF188 - DNAJ HEAT SHOCK PROTEIN Description:  DnaJ heat shock family protein
Genomic Order:  640 Name:  ? Medtr4g015840
Secondary Identifier:  ? PAC:31113312
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g015840 0.5kb upstream 0.5kb upstream 4519 true chr4: 4796670-4801188 Medicago truncatula
Medtr4g015840 0.5kb upstream 0.5kb upstream 500 false chr4: 4800689-4801188 Medicago truncatula
Medtr4g015840 0.5kb downstream 0.5kb downstream 4519 true chr4: 4796170-4800688 Medicago truncatula
Medtr4g015840 0.5kb downstream 0.5kb downstream 500 false chr4: 4796170-4796669 Medicago truncatula
Medtr4g015840 1.0kb upstream 1.0kb upstream 5019 true chr4: 4796670-4801688 Medicago truncatula
Medtr4g015840 1.0kb upstream 1.0kb upstream 1000 false chr4: 4800689-4801688 Medicago truncatula
Medtr4g015840 1.0kb downstream 1.0kb downstream 5019 true chr4: 4795670-4800688 Medicago truncatula
Medtr4g015840 1.0kb downstream 1.0kb downstream 1000 false chr4: 4795670-4796669 Medicago truncatula
Medtr4g015840 2.0kb upstream 2.0kb upstream 6019 true chr4: 4796670-4802688 Medicago truncatula
Medtr4g015840 2.0kb upstream 2.0kb upstream 2000 false chr4: 4800689-4802688 Medicago truncatula
Medtr4g015840 2.0kb downstream 2.0kb downstream 6019 true chr4: 4794670-4800688 Medicago truncatula
Medtr4g015840 2.0kb downstream 2.0kb downstream 2000 false chr4: 4794670-4796669 Medicago truncatula
Medtr4g015840 5.0kb upstream 5.0kb upstream 9019 true chr4: 4796670-4805688 Medicago truncatula
Medtr4g015840 5.0kb upstream 5.0kb upstream 5000 false chr4: 4800689-4805688 Medicago truncatula
Medtr4g015840 5.0kb downstream 5.0kb downstream 9019 true chr4: 4791670-4800688 Medicago truncatula
Medtr4g015840 5.0kb downstream 5.0kb downstream 5000 false chr4: 4791670-4796669 Medicago truncatula
Medtr4g015840 10.0kb upstream 10.0kb upstream 14019 true chr4: 4796670-4810688 Medicago truncatula
Medtr4g015840 10.0kb upstream 10.0kb upstream 10000 false chr4: 4800689-4810688 Medicago truncatula
Medtr4g015840 10.0kb downstream 10.0kb downstream 14019 true chr4: 4786670-4800688 Medicago truncatula
Medtr4g015840 10.0kb downstream 10.0kb downstream 10000 false chr4: 4786670-4796669 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309230 5265 Fabidae View MSA
124067139 5270 Rosid View MSA
123747669 5271 Pentapetalae View MSA
122796849 5272 Eudicot View MSA
122043533 5273 Angiosperm View MSA
123429128 5275 Viridiplantae View MSA
121350390 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.357        
cufflinks 4.386       Low
cufflinks 5.061        
cufflinks 7.4        
cufflinks 7.163        
cufflinks 4.396       Low
cufflinks 7.936       High
cufflinks 4.747        
cufflinks 8.704       High

0 Strain