Gene : Medtr4g015630 M. truncatula Mt4.0v1
Defline:  (1 of 2) 1.14.99.33 - Delta(12)-fatty acid dehydrogenase / Linoleate Delta-12-fatty acid acetylenase (desaturase) Description:  temperature-sensitive omega-3 fatty acid desaturase
Genomic Order:  626 Name:  ? Medtr4g015630
Secondary Identifier:  ? PAC:31111294
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6013 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g015630 0.5kb upstream 0.5kb upstream 4949 true chr4: 4703249-4708197 Medicago truncatula
Medtr4g015630 0.5kb upstream 0.5kb upstream 500 false chr4: 4703249-4703748 Medicago truncatula
Medtr4g015630 0.5kb downstream 0.5kb downstream 4949 true chr4: 4703749-4708697 Medicago truncatula
Medtr4g015630 0.5kb downstream 0.5kb downstream 500 false chr4: 4708198-4708697 Medicago truncatula
Medtr4g015630 1.0kb upstream 1.0kb upstream 5449 true chr4: 4702749-4708197 Medicago truncatula
Medtr4g015630 1.0kb upstream 1.0kb upstream 1000 false chr4: 4702749-4703748 Medicago truncatula
Medtr4g015630 1.0kb downstream 1.0kb downstream 5449 true chr4: 4703749-4709197 Medicago truncatula
Medtr4g015630 1.0kb downstream 1.0kb downstream 1000 false chr4: 4708198-4709197 Medicago truncatula
Medtr4g015630 2.0kb upstream 2.0kb upstream 6449 true chr4: 4701749-4708197 Medicago truncatula
Medtr4g015630 2.0kb upstream 2.0kb upstream 2000 false chr4: 4701749-4703748 Medicago truncatula
Medtr4g015630 2.0kb downstream 2.0kb downstream 6449 true chr4: 4703749-4710197 Medicago truncatula
Medtr4g015630 2.0kb downstream 2.0kb downstream 2000 false chr4: 4708198-4710197 Medicago truncatula
Medtr4g015630 5.0kb upstream 5.0kb upstream 9449 true chr4: 4698749-4708197 Medicago truncatula
Medtr4g015630 5.0kb upstream 5.0kb upstream 5000 false chr4: 4698749-4703748 Medicago truncatula
Medtr4g015630 5.0kb downstream 5.0kb downstream 9449 true chr4: 4703749-4713197 Medicago truncatula
Medtr4g015630 5.0kb downstream 5.0kb downstream 5000 false chr4: 4708198-4713197 Medicago truncatula
Medtr4g015630 10.0kb upstream 10.0kb upstream 14449 true chr4: 4693749-4708197 Medicago truncatula
Medtr4g015630 10.0kb upstream 10.0kb upstream 10000 false chr4: 4693749-4703748 Medicago truncatula
Medtr4g015630 10.0kb downstream 10.0kb downstream 14449 true chr4: 4703749-4718197 Medicago truncatula
Medtr4g015630 10.0kb downstream 10.0kb downstream 10000 false chr4: 4708198-4718197 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311667 5265 Fabidae View MSA
124069335 5270 Rosid View MSA
123752062 5271 Pentapetalae View MSA
122788316 5272 Eudicot View MSA
122045494 5273 Angiosperm View MSA
121344489 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.875        
cufflinks 62.957     High High
cufflinks 31.865     High  
cufflinks 0.884       Low
cufflinks 83.475     High High
cufflinks 1.908        
cufflinks 3.568        
cufflinks 44.045     High  
cufflinks 2.355        

0 Strain