Gene : Medtr4g015650 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR35499:SF2 - ALC-INTERACTING PROTEIN 1 Description:  ALC-interacting protein
Genomic Order:  627 Name:  ? Medtr4g015650
Secondary Identifier:  ? PAC:31112438
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g015650 0.5kb upstream 0.5kb upstream 2702 true chr4: 4716636-4719337 Medicago truncatula
Medtr4g015650 0.5kb upstream 0.5kb upstream 500 false chr4: 4716636-4717135 Medicago truncatula
Medtr4g015650 0.5kb downstream 0.5kb downstream 2702 true chr4: 4717136-4719837 Medicago truncatula
Medtr4g015650 0.5kb downstream 0.5kb downstream 500 false chr4: 4719338-4719837 Medicago truncatula
Medtr4g015650 1.0kb upstream 1.0kb upstream 3202 true chr4: 4716136-4719337 Medicago truncatula
Medtr4g015650 1.0kb upstream 1.0kb upstream 1000 false chr4: 4716136-4717135 Medicago truncatula
Medtr4g015650 1.0kb downstream 1.0kb downstream 3202 true chr4: 4717136-4720337 Medicago truncatula
Medtr4g015650 1.0kb downstream 1.0kb downstream 1000 false chr4: 4719338-4720337 Medicago truncatula
Medtr4g015650 2.0kb upstream 2.0kb upstream 4202 true chr4: 4715136-4719337 Medicago truncatula
Medtr4g015650 2.0kb upstream 2.0kb upstream 2000 false chr4: 4715136-4717135 Medicago truncatula
Medtr4g015650 2.0kb downstream 2.0kb downstream 4202 true chr4: 4717136-4721337 Medicago truncatula
Medtr4g015650 2.0kb downstream 2.0kb downstream 2000 false chr4: 4719338-4721337 Medicago truncatula
Medtr4g015650 5.0kb upstream 5.0kb upstream 7202 true chr4: 4712136-4719337 Medicago truncatula
Medtr4g015650 5.0kb upstream 5.0kb upstream 5000 false chr4: 4712136-4717135 Medicago truncatula
Medtr4g015650 5.0kb downstream 5.0kb downstream 7202 true chr4: 4717136-4724337 Medicago truncatula
Medtr4g015650 5.0kb downstream 5.0kb downstream 5000 false chr4: 4719338-4724337 Medicago truncatula
Medtr4g015650 10.0kb upstream 10.0kb upstream 12202 true chr4: 4707136-4719337 Medicago truncatula
Medtr4g015650 10.0kb upstream 10.0kb upstream 10000 false chr4: 4707136-4717135 Medicago truncatula
Medtr4g015650 10.0kb downstream 10.0kb downstream 12202 true chr4: 4717136-4729337 Medicago truncatula
Medtr4g015650 10.0kb downstream 10.0kb downstream 10000 false chr4: 4719338-4729337 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309323 5265 Fabidae View MSA
124062218 5270 Rosid View MSA
123751087 5271 Pentapetalae View MSA
122789400 5272 Eudicot View MSA
122050315 5273 Angiosperm View MSA
121311850 5274 Embryophyte View MSA
123349090 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.201     High High
cufflinks 7.82        
cufflinks 4.601        
cufflinks 3.356       Low
cufflinks 3.552       Low
cufflinks 4.017        
cufflinks 11.792     High High
cufflinks 6.323        
cufflinks 7.992        

0 Strain