Gene : Medtr4g017790 M. truncatula Mt4.0v1
Defline:  (1 of 603) PF07127 - Late nodulin protein (Nodulin_late) Description:  Nodule Cysteine-Rich (NCR) secreted peptide
Genomic Order:  744 Name:  ? Medtr4g017790
Secondary Identifier:  ? PAC:31112996
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g017790 0.5kb upstream 0.5kb upstream 889 true chr4: 5615417-5616305 Medicago truncatula
Medtr4g017790 0.5kb upstream 0.5kb upstream 500 false chr4: 5615806-5616305 Medicago truncatula
Medtr4g017790 0.5kb downstream 0.5kb downstream 889 true chr4: 5614917-5615805 Medicago truncatula
Medtr4g017790 0.5kb downstream 0.5kb downstream 500 false chr4: 5614917-5615416 Medicago truncatula
Medtr4g017790 1.0kb upstream 1.0kb upstream 1389 true chr4: 5615417-5616805 Medicago truncatula
Medtr4g017790 1.0kb upstream 1.0kb upstream 1000 false chr4: 5615806-5616805 Medicago truncatula
Medtr4g017790 1.0kb downstream 1.0kb downstream 1389 true chr4: 5614417-5615805 Medicago truncatula
Medtr4g017790 1.0kb downstream 1.0kb downstream 1000 false chr4: 5614417-5615416 Medicago truncatula
Medtr4g017790 2.0kb upstream 2.0kb upstream 2389 true chr4: 5615417-5617805 Medicago truncatula
Medtr4g017790 2.0kb upstream 2.0kb upstream 2000 false chr4: 5615806-5617805 Medicago truncatula
Medtr4g017790 2.0kb downstream 2.0kb downstream 2389 true chr4: 5613417-5615805 Medicago truncatula
Medtr4g017790 2.0kb downstream 2.0kb downstream 2000 false chr4: 5613417-5615416 Medicago truncatula
Medtr4g017790 5.0kb upstream 5.0kb upstream 5389 true chr4: 5615417-5620805 Medicago truncatula
Medtr4g017790 5.0kb upstream 5.0kb upstream 5000 false chr4: 5615806-5620805 Medicago truncatula
Medtr4g017790 5.0kb downstream 5.0kb downstream 5389 true chr4: 5610417-5615805 Medicago truncatula
Medtr4g017790 5.0kb downstream 5.0kb downstream 5000 false chr4: 5610417-5615416 Medicago truncatula
Medtr4g017790 10.0kb upstream 10.0kb upstream 10389 true chr4: 5615417-5625805 Medicago truncatula
Medtr4g017790 10.0kb upstream 10.0kb upstream 10000 false chr4: 5615806-5625805 Medicago truncatula
Medtr4g017790 10.0kb downstream 10.0kb downstream 10389 true chr4: 5605417-5615805 Medicago truncatula
Medtr4g017790 10.0kb downstream 10.0kb downstream 10000 false chr4: 5605417-5615416 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121633092 5273 Angiosperm View MSA
122271929 5265 Fabidae View MSA
124012490 5270 Rosid View MSA
123586351 5271 Pentapetalae View MSA
122621045 5272 Eudicot View MSA
120905196 5274 Embryophyte View MSA
122945845 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 52.13     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain