Gene : Medtr4g017200 M. truncatula Mt4.0v1
Defline:  (1 of 9) 4.1.1.1 - Pyruvate decarboxylase / Pyruvic decarboxylase Description:  pyruvate decarboxylase
Genomic Order:  702 Name:  ? Medtr4g017200
Secondary Identifier:  ? PAC:31108299
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5486 Medicago truncatula pathologic  
Mtruncatula PWY-6330 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g017200 0.5kb upstream 0.5kb upstream 3810 true chr4: 5329227-5333036 Medicago truncatula
Medtr4g017200 0.5kb upstream 0.5kb upstream 500 false chr4: 5329227-5329726 Medicago truncatula
Medtr4g017200 0.5kb downstream 0.5kb downstream 3810 true chr4: 5329727-5333536 Medicago truncatula
Medtr4g017200 0.5kb downstream 0.5kb downstream 500 false chr4: 5333037-5333536 Medicago truncatula
Medtr4g017200 1.0kb upstream 1.0kb upstream 4310 true chr4: 5328727-5333036 Medicago truncatula
Medtr4g017200 1.0kb upstream 1.0kb upstream 1000 false chr4: 5328727-5329726 Medicago truncatula
Medtr4g017200 1.0kb downstream 1.0kb downstream 4310 true chr4: 5329727-5334036 Medicago truncatula
Medtr4g017200 1.0kb downstream 1.0kb downstream 1000 false chr4: 5333037-5334036 Medicago truncatula
Medtr4g017200 2.0kb upstream 2.0kb upstream 5310 true chr4: 5327727-5333036 Medicago truncatula
Medtr4g017200 2.0kb upstream 2.0kb upstream 2000 false chr4: 5327727-5329726 Medicago truncatula
Medtr4g017200 2.0kb downstream 2.0kb downstream 5310 true chr4: 5329727-5335036 Medicago truncatula
Medtr4g017200 2.0kb downstream 2.0kb downstream 2000 false chr4: 5333037-5335036 Medicago truncatula
Medtr4g017200 5.0kb upstream 5.0kb upstream 8310 true chr4: 5324727-5333036 Medicago truncatula
Medtr4g017200 5.0kb upstream 5.0kb upstream 5000 false chr4: 5324727-5329726 Medicago truncatula
Medtr4g017200 5.0kb downstream 5.0kb downstream 8310 true chr4: 5329727-5338036 Medicago truncatula
Medtr4g017200 5.0kb downstream 5.0kb downstream 5000 false chr4: 5333037-5338036 Medicago truncatula
Medtr4g017200 10.0kb upstream 10.0kb upstream 13310 true chr4: 5319727-5333036 Medicago truncatula
Medtr4g017200 10.0kb upstream 10.0kb upstream 10000 false chr4: 5319727-5329726 Medicago truncatula
Medtr4g017200 10.0kb downstream 10.0kb downstream 13310 true chr4: 5329727-5343036 Medicago truncatula
Medtr4g017200 10.0kb downstream 10.0kb downstream 10000 false chr4: 5333037-5343036 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310643 5265 Fabidae View MSA
124061112 5270 Rosid View MSA
123745857 5271 Pentapetalae View MSA
122791773 5272 Eudicot View MSA
122042059 5273 Angiosperm View MSA
121351042 5274 Embryophyte View MSA
123426958 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 109.198     High  
cufflinks 1.236        
cufflinks 1.88        
cufflinks 128.281     High  
cufflinks 0.32       Low
cufflinks 41.062     High  
cufflinks 332.777     High High
cufflinks 0.872       Low
cufflinks 265.088     High High

0 Strain