Gene : Medtr4g017030 M. truncatula Mt4.0v1
Defline:  (1 of 13) PTHR31238:SF42 - GERMIN-LIKE PROTEIN SUBFAMILY 1 MEMBER 10-RELATED Description:  germin family protein
Genomic Order:  696 Name:  ? Medtr4g017030
Secondary Identifier:  ? PAC:31113066
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g017030 0.5kb upstream 0.5kb upstream 1662 true chr4: 5278103-5279764 Medicago truncatula
Medtr4g017030 0.5kb upstream 0.5kb upstream 500 false chr4: 5279265-5279764 Medicago truncatula
Medtr4g017030 0.5kb downstream 0.5kb downstream 1662 true chr4: 5277603-5279264 Medicago truncatula
Medtr4g017030 0.5kb downstream 0.5kb downstream 500 false chr4: 5277603-5278102 Medicago truncatula
Medtr4g017030 1.0kb upstream 1.0kb upstream 2162 true chr4: 5278103-5280264 Medicago truncatula
Medtr4g017030 1.0kb upstream 1.0kb upstream 1000 false chr4: 5279265-5280264 Medicago truncatula
Medtr4g017030 1.0kb downstream 1.0kb downstream 2162 true chr4: 5277103-5279264 Medicago truncatula
Medtr4g017030 1.0kb downstream 1.0kb downstream 1000 false chr4: 5277103-5278102 Medicago truncatula
Medtr4g017030 2.0kb upstream 2.0kb upstream 3162 true chr4: 5278103-5281264 Medicago truncatula
Medtr4g017030 2.0kb upstream 2.0kb upstream 2000 false chr4: 5279265-5281264 Medicago truncatula
Medtr4g017030 2.0kb downstream 2.0kb downstream 3162 true chr4: 5276103-5279264 Medicago truncatula
Medtr4g017030 2.0kb downstream 2.0kb downstream 2000 false chr4: 5276103-5278102 Medicago truncatula
Medtr4g017030 5.0kb upstream 5.0kb upstream 6162 true chr4: 5278103-5284264 Medicago truncatula
Medtr4g017030 5.0kb upstream 5.0kb upstream 5000 false chr4: 5279265-5284264 Medicago truncatula
Medtr4g017030 5.0kb downstream 5.0kb downstream 6162 true chr4: 5273103-5279264 Medicago truncatula
Medtr4g017030 5.0kb downstream 5.0kb downstream 5000 false chr4: 5273103-5278102 Medicago truncatula
Medtr4g017030 10.0kb upstream 10.0kb upstream 11162 true chr4: 5278103-5289264 Medicago truncatula
Medtr4g017030 10.0kb upstream 10.0kb upstream 10000 false chr4: 5279265-5289264 Medicago truncatula
Medtr4g017030 10.0kb downstream 10.0kb downstream 11162 true chr4: 5268103-5279264 Medicago truncatula
Medtr4g017030 10.0kb downstream 10.0kb downstream 10000 false chr4: 5268103-5278102 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314979 5265 Fabidae View MSA
124073814 5270 Rosid View MSA
123752925 5271 Pentapetalae View MSA
122797163 5272 Eudicot View MSA
122049786 5273 Angiosperm View MSA
121349986 5274 Embryophyte View MSA
123427618 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.985       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 12.066     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 15.838     High  
cufflinks 4.364        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 6.285        

0 Strain