Gene : Medtr4g016980 M. truncatula Mt4.0v1
Defline:  (1 of 2) 3.5.4.17//3.5.4.6 - AMP deaminase / Myoadenylate deaminase Description:  AMP deaminase
Genomic Order:  695 Name:  ? Medtr4g016980
Secondary Identifier:  ? PAC:31113634
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6596 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g016980 0.5kb upstream 0.5kb upstream 11225 true chr4: 5246149-5257373 Medicago truncatula
Medtr4g016980 0.5kb upstream 0.5kb upstream 500 false chr4: 5256874-5257373 Medicago truncatula
Medtr4g016980 0.5kb downstream 0.5kb downstream 11225 true chr4: 5245649-5256873 Medicago truncatula
Medtr4g016980 0.5kb downstream 0.5kb downstream 500 false chr4: 5245649-5246148 Medicago truncatula
Medtr4g016980 1.0kb upstream 1.0kb upstream 11725 true chr4: 5246149-5257873 Medicago truncatula
Medtr4g016980 1.0kb upstream 1.0kb upstream 1000 false chr4: 5256874-5257873 Medicago truncatula
Medtr4g016980 1.0kb downstream 1.0kb downstream 11725 true chr4: 5245149-5256873 Medicago truncatula
Medtr4g016980 1.0kb downstream 1.0kb downstream 1000 false chr4: 5245149-5246148 Medicago truncatula
Medtr4g016980 2.0kb upstream 2.0kb upstream 12725 true chr4: 5246149-5258873 Medicago truncatula
Medtr4g016980 2.0kb upstream 2.0kb upstream 2000 false chr4: 5256874-5258873 Medicago truncatula
Medtr4g016980 2.0kb downstream 2.0kb downstream 12725 true chr4: 5244149-5256873 Medicago truncatula
Medtr4g016980 2.0kb downstream 2.0kb downstream 2000 false chr4: 5244149-5246148 Medicago truncatula
Medtr4g016980 5.0kb upstream 5.0kb upstream 15725 true chr4: 5246149-5261873 Medicago truncatula
Medtr4g016980 5.0kb upstream 5.0kb upstream 5000 false chr4: 5256874-5261873 Medicago truncatula
Medtr4g016980 5.0kb downstream 5.0kb downstream 15725 true chr4: 5241149-5256873 Medicago truncatula
Medtr4g016980 5.0kb downstream 5.0kb downstream 5000 false chr4: 5241149-5246148 Medicago truncatula
Medtr4g016980 10.0kb upstream 10.0kb upstream 20725 true chr4: 5246149-5266873 Medicago truncatula
Medtr4g016980 10.0kb upstream 10.0kb upstream 10000 false chr4: 5256874-5266873 Medicago truncatula
Medtr4g016980 10.0kb downstream 10.0kb downstream 20725 true chr4: 5236149-5256873 Medicago truncatula
Medtr4g016980 10.0kb downstream 10.0kb downstream 10000 false chr4: 5236149-5246148 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302512 5265 Fabidae View MSA
124067262 5270 Rosid View MSA
123738882 5271 Pentapetalae View MSA
122789679 5272 Eudicot View MSA
122046133 5273 Angiosperm View MSA
121347904 5274 Embryophyte View MSA
123428411 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.977        
cufflinks 5.423        
cufflinks 7.668       High
cufflinks 1.326       Low
cufflinks 7.105        
cufflinks 1.288       Low
cufflinks 2.133        
cufflinks 7.947       High
cufflinks 2.586        

0 Strain