Gene : Medtr4g016590 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13471 - TETRATRICOPEPTIDE-LIKE HELICAL Description:  UPF0614 C14orf102-like protein
Genomic Order:  665 Name:  ? Medtr4g016590
Secondary Identifier:  ? PAC:31115032
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g016590 0.5kb upstream 0.5kb upstream 9818 true chr4: 5074160-5083977 Medicago truncatula
Medtr4g016590 0.5kb upstream 0.5kb upstream 500 false chr4: 5074160-5074659 Medicago truncatula
Medtr4g016590 0.5kb downstream 0.5kb downstream 9818 true chr4: 5074660-5084477 Medicago truncatula
Medtr4g016590 0.5kb downstream 0.5kb downstream 500 false chr4: 5083978-5084477 Medicago truncatula
Medtr4g016590 1.0kb upstream 1.0kb upstream 10318 true chr4: 5073660-5083977 Medicago truncatula
Medtr4g016590 1.0kb upstream 1.0kb upstream 1000 false chr4: 5073660-5074659 Medicago truncatula
Medtr4g016590 1.0kb downstream 1.0kb downstream 10318 true chr4: 5074660-5084977 Medicago truncatula
Medtr4g016590 1.0kb downstream 1.0kb downstream 1000 false chr4: 5083978-5084977 Medicago truncatula
Medtr4g016590 2.0kb upstream 2.0kb upstream 11318 true chr4: 5072660-5083977 Medicago truncatula
Medtr4g016590 2.0kb upstream 2.0kb upstream 2000 false chr4: 5072660-5074659 Medicago truncatula
Medtr4g016590 2.0kb downstream 2.0kb downstream 11318 true chr4: 5074660-5085977 Medicago truncatula
Medtr4g016590 2.0kb downstream 2.0kb downstream 2000 false chr4: 5083978-5085977 Medicago truncatula
Medtr4g016590 5.0kb upstream 5.0kb upstream 14318 true chr4: 5069660-5083977 Medicago truncatula
Medtr4g016590 5.0kb upstream 5.0kb upstream 5000 false chr4: 5069660-5074659 Medicago truncatula
Medtr4g016590 5.0kb downstream 5.0kb downstream 14318 true chr4: 5074660-5088977 Medicago truncatula
Medtr4g016590 5.0kb downstream 5.0kb downstream 5000 false chr4: 5083978-5088977 Medicago truncatula
Medtr4g016590 10.0kb upstream 10.0kb upstream 19318 true chr4: 5064660-5083977 Medicago truncatula
Medtr4g016590 10.0kb upstream 10.0kb upstream 10000 false chr4: 5064660-5074659 Medicago truncatula
Medtr4g016590 10.0kb downstream 10.0kb downstream 19318 true chr4: 5074660-5093977 Medicago truncatula
Medtr4g016590 10.0kb downstream 10.0kb downstream 10000 false chr4: 5083978-5093977 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026294 5273 Angiosperm View MSA
122303651 5265 Fabidae View MSA
124063605 5270 Rosid View MSA
123738966 5271 Pentapetalae View MSA
122791971 5272 Eudicot View MSA
121345312 5274 Embryophyte View MSA
123423930 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.693        
cufflinks 3.162        
cufflinks 3.215        
cufflinks 0.859       Low
cufflinks 3.279        
cufflinks 0.993       Low
cufflinks 2.009        
cufflinks 2.537        
cufflinks 1.505        

0 Strain