Gene : Medtr4g016720 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED Description:  vacuolar cation/proton exchanger 3
Genomic Order:  676 Name:  ? Medtr4g016720
Secondary Identifier:  ? PAC:31111699
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g016720 0.5kb upstream 0.5kb upstream 4977 true chr4: 5127180-5132156 Medicago truncatula
Medtr4g016720 0.5kb upstream 0.5kb upstream 500 false chr4: 5127180-5127679 Medicago truncatula
Medtr4g016720 0.5kb downstream 0.5kb downstream 4977 true chr4: 5127680-5132656 Medicago truncatula
Medtr4g016720 0.5kb downstream 0.5kb downstream 500 false chr4: 5132157-5132656 Medicago truncatula
Medtr4g016720 1.0kb upstream 1.0kb upstream 5477 true chr4: 5126680-5132156 Medicago truncatula
Medtr4g016720 1.0kb upstream 1.0kb upstream 1000 false chr4: 5126680-5127679 Medicago truncatula
Medtr4g016720 1.0kb downstream 1.0kb downstream 5477 true chr4: 5127680-5133156 Medicago truncatula
Medtr4g016720 1.0kb downstream 1.0kb downstream 1000 false chr4: 5132157-5133156 Medicago truncatula
Medtr4g016720 2.0kb upstream 2.0kb upstream 6477 true chr4: 5125680-5132156 Medicago truncatula
Medtr4g016720 2.0kb upstream 2.0kb upstream 2000 false chr4: 5125680-5127679 Medicago truncatula
Medtr4g016720 2.0kb downstream 2.0kb downstream 6477 true chr4: 5127680-5134156 Medicago truncatula
Medtr4g016720 2.0kb downstream 2.0kb downstream 2000 false chr4: 5132157-5134156 Medicago truncatula
Medtr4g016720 5.0kb upstream 5.0kb upstream 9477 true chr4: 5122680-5132156 Medicago truncatula
Medtr4g016720 5.0kb upstream 5.0kb upstream 5000 false chr4: 5122680-5127679 Medicago truncatula
Medtr4g016720 5.0kb downstream 5.0kb downstream 9477 true chr4: 5127680-5137156 Medicago truncatula
Medtr4g016720 5.0kb downstream 5.0kb downstream 5000 false chr4: 5132157-5137156 Medicago truncatula
Medtr4g016720 10.0kb upstream 10.0kb upstream 14477 true chr4: 5117680-5132156 Medicago truncatula
Medtr4g016720 10.0kb upstream 10.0kb upstream 10000 false chr4: 5117680-5127679 Medicago truncatula
Medtr4g016720 10.0kb downstream 10.0kb downstream 14477 true chr4: 5127680-5142156 Medicago truncatula
Medtr4g016720 10.0kb downstream 10.0kb downstream 10000 false chr4: 5132157-5142156 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297107 5265 Fabidae View MSA
124065189 5270 Rosid View MSA
123739014 5271 Pentapetalae View MSA
122792056 5272 Eudicot View MSA
122048075 5273 Angiosperm View MSA
121310844 5274 Embryophyte View MSA
123427763 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.064     Low  
cufflinks 0.03     Low Low
cufflinks 0.124        
cufflinks 0.069        
cufflinks 0.072        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.195        
cufflinks 0.081        
cufflinks 0.325       High

0 Strain