Gene : Medtr4g017820 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11730:SF38 - AMMONIUM TRANSPORTER 2 Description:  ammonium transporter 1 protein
Genomic Order:  747 Name:  ? Medtr4g017820
Secondary Identifier:  ? PAC:31107315
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g017820 0.5kb upstream 0.5kb upstream 4318 true chr4: 5621961-5626278 Medicago truncatula
Medtr4g017820 0.5kb upstream 0.5kb upstream 500 false chr4: 5625779-5626278 Medicago truncatula
Medtr4g017820 0.5kb downstream 0.5kb downstream 4318 true chr4: 5621461-5625778 Medicago truncatula
Medtr4g017820 0.5kb downstream 0.5kb downstream 500 false chr4: 5621461-5621960 Medicago truncatula
Medtr4g017820 1.0kb upstream 1.0kb upstream 4818 true chr4: 5621961-5626778 Medicago truncatula
Medtr4g017820 1.0kb upstream 1.0kb upstream 1000 false chr4: 5625779-5626778 Medicago truncatula
Medtr4g017820 1.0kb downstream 1.0kb downstream 4818 true chr4: 5620961-5625778 Medicago truncatula
Medtr4g017820 1.0kb downstream 1.0kb downstream 1000 false chr4: 5620961-5621960 Medicago truncatula
Medtr4g017820 2.0kb upstream 2.0kb upstream 5818 true chr4: 5621961-5627778 Medicago truncatula
Medtr4g017820 2.0kb upstream 2.0kb upstream 2000 false chr4: 5625779-5627778 Medicago truncatula
Medtr4g017820 2.0kb downstream 2.0kb downstream 5818 true chr4: 5619961-5625778 Medicago truncatula
Medtr4g017820 2.0kb downstream 2.0kb downstream 2000 false chr4: 5619961-5621960 Medicago truncatula
Medtr4g017820 5.0kb upstream 5.0kb upstream 8818 true chr4: 5621961-5630778 Medicago truncatula
Medtr4g017820 5.0kb upstream 5.0kb upstream 5000 false chr4: 5625779-5630778 Medicago truncatula
Medtr4g017820 5.0kb downstream 5.0kb downstream 8818 true chr4: 5616961-5625778 Medicago truncatula
Medtr4g017820 5.0kb downstream 5.0kb downstream 5000 false chr4: 5616961-5621960 Medicago truncatula
Medtr4g017820 10.0kb upstream 10.0kb upstream 13818 true chr4: 5621961-5635778 Medicago truncatula
Medtr4g017820 10.0kb upstream 10.0kb upstream 10000 false chr4: 5625779-5635778 Medicago truncatula
Medtr4g017820 10.0kb downstream 10.0kb downstream 13818 true chr4: 5611961-5625778 Medicago truncatula
Medtr4g017820 10.0kb downstream 10.0kb downstream 10000 false chr4: 5611961-5621960 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310224 5265 Fabidae View MSA
124072416 5270 Rosid View MSA
123737751 5271 Pentapetalae View MSA
122794569 5272 Eudicot View MSA
122050479 5273 Angiosperm View MSA
121349558 5274 Embryophyte View MSA
123426943 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.527       Low
cufflinks 1.96        
cufflinks 1.186        
cufflinks 11.078     High High
cufflinks 5.287        
cufflinks 1.826        
cufflinks 9.324       High
cufflinks 1.408        
cufflinks 6.732        

0 Strain