Gene : Medtr4g020080 M. truncatula Mt4.0v1
Defline:  (1 of 11) PF03909 - BSD domain (BSD) Description:  BSD domain protein
Genomic Order:  859 Name:  ? Medtr4g020080
Secondary Identifier:  ? PAC:31108817
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g020080 0.5kb upstream 0.5kb upstream 3433 true chr4: 6429647-6433079 Medicago truncatula
Medtr4g020080 0.5kb upstream 0.5kb upstream 500 false chr4: 6432580-6433079 Medicago truncatula
Medtr4g020080 0.5kb downstream 0.5kb downstream 3433 true chr4: 6429147-6432579 Medicago truncatula
Medtr4g020080 0.5kb downstream 0.5kb downstream 500 false chr4: 6429147-6429646 Medicago truncatula
Medtr4g020080 1.0kb upstream 1.0kb upstream 3933 true chr4: 6429647-6433579 Medicago truncatula
Medtr4g020080 1.0kb upstream 1.0kb upstream 1000 false chr4: 6432580-6433579 Medicago truncatula
Medtr4g020080 1.0kb downstream 1.0kb downstream 3933 true chr4: 6428647-6432579 Medicago truncatula
Medtr4g020080 1.0kb downstream 1.0kb downstream 1000 false chr4: 6428647-6429646 Medicago truncatula
Medtr4g020080 2.0kb upstream 2.0kb upstream 4933 true chr4: 6429647-6434579 Medicago truncatula
Medtr4g020080 2.0kb upstream 2.0kb upstream 2000 false chr4: 6432580-6434579 Medicago truncatula
Medtr4g020080 2.0kb downstream 2.0kb downstream 4933 true chr4: 6427647-6432579 Medicago truncatula
Medtr4g020080 2.0kb downstream 2.0kb downstream 2000 false chr4: 6427647-6429646 Medicago truncatula
Medtr4g020080 5.0kb upstream 5.0kb upstream 7933 true chr4: 6429647-6437579 Medicago truncatula
Medtr4g020080 5.0kb upstream 5.0kb upstream 5000 false chr4: 6432580-6437579 Medicago truncatula
Medtr4g020080 5.0kb downstream 5.0kb downstream 7933 true chr4: 6424647-6432579 Medicago truncatula
Medtr4g020080 5.0kb downstream 5.0kb downstream 5000 false chr4: 6424647-6429646 Medicago truncatula
Medtr4g020080 10.0kb upstream 10.0kb upstream 12933 true chr4: 6429647-6442579 Medicago truncatula
Medtr4g020080 10.0kb upstream 10.0kb upstream 10000 false chr4: 6432580-6442579 Medicago truncatula
Medtr4g020080 10.0kb downstream 10.0kb downstream 12933 true chr4: 6419647-6432579 Medicago truncatula
Medtr4g020080 10.0kb downstream 10.0kb downstream 10000 false chr4: 6419647-6429646 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299037 5265 Fabidae View MSA
124061374 5270 Rosid View MSA
123737420 5271 Pentapetalae View MSA
122787609 5272 Eudicot View MSA
122050169 5273 Angiosperm View MSA
121311775 5274 Embryophyte View MSA
123349027 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.337        
cufflinks 0.458        
cufflinks 0.582        
cufflinks 0.599        
cufflinks 0.533        
cufflinks 0.238       Low
cufflinks 0.598        
cufflinks 0.468        
cufflinks 0.391        

0 Strain