Gene : Medtr4g005390 M. truncatula Mt4.0v1
Defline:  (1 of 14) PF04755 - PAP_fibrillin (PAP_fibrillin) Description:  plastid lipid-associated protein
Genomic Order:  26 Name:  ? Medtr4g005390
Secondary Identifier:  ? PAC:31107916
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g005390 0.5kb upstream 0.5kb upstream 4596 true chr4: 236312-240907 Medicago truncatula
Medtr4g005390 0.5kb upstream 0.5kb upstream 500 false chr4: 240408-240907 Medicago truncatula
Medtr4g005390 0.5kb downstream 0.5kb downstream 4596 true chr4: 235812-240407 Medicago truncatula
Medtr4g005390 0.5kb downstream 0.5kb downstream 500 false chr4: 235812-236311 Medicago truncatula
Medtr4g005390 1.0kb upstream 1.0kb upstream 5096 true chr4: 236312-241407 Medicago truncatula
Medtr4g005390 1.0kb upstream 1.0kb upstream 1000 false chr4: 240408-241407 Medicago truncatula
Medtr4g005390 1.0kb downstream 1.0kb downstream 5096 true chr4: 235312-240407 Medicago truncatula
Medtr4g005390 1.0kb downstream 1.0kb downstream 1000 false chr4: 235312-236311 Medicago truncatula
Medtr4g005390 2.0kb upstream 2.0kb upstream 6096 true chr4: 236312-242407 Medicago truncatula
Medtr4g005390 2.0kb upstream 2.0kb upstream 2000 false chr4: 240408-242407 Medicago truncatula
Medtr4g005390 2.0kb downstream 2.0kb downstream 6096 true chr4: 234312-240407 Medicago truncatula
Medtr4g005390 2.0kb downstream 2.0kb downstream 2000 false chr4: 234312-236311 Medicago truncatula
Medtr4g005390 5.0kb upstream 5.0kb upstream 9096 true chr4: 236312-245407 Medicago truncatula
Medtr4g005390 5.0kb upstream 5.0kb upstream 5000 false chr4: 240408-245407 Medicago truncatula
Medtr4g005390 5.0kb downstream 5.0kb downstream 9096 true chr4: 231312-240407 Medicago truncatula
Medtr4g005390 5.0kb downstream 5.0kb downstream 5000 false chr4: 231312-236311 Medicago truncatula
Medtr4g005390 10.0kb upstream 10.0kb upstream 14096 true chr4: 236312-250407 Medicago truncatula
Medtr4g005390 10.0kb upstream 10.0kb upstream 10000 false chr4: 240408-250407 Medicago truncatula
Medtr4g005390 10.0kb downstream 10.0kb downstream 14096 true chr4: 226312-240407 Medicago truncatula
Medtr4g005390 10.0kb downstream 10.0kb downstream 10000 false chr4: 226312-236311 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309827 5265 Fabidae View MSA
124069278 5270 Rosid View MSA
123746031 5271 Pentapetalae View MSA
122794161 5272 Eudicot View MSA
122048441 5273 Angiosperm View MSA
121348258 5274 Embryophyte View MSA
123425771 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.549        
cufflinks 11.159     High High
cufflinks 8.257        
cufflinks 0.339       Low
cufflinks 10.12       High
cufflinks 0.433       Low
cufflinks 0.904        
cufflinks 10.198     High High
cufflinks 0.416       Low

0 Strain