Gene : Medtr4g005450 M. truncatula Mt4.0v1
Defline:  (1 of 4) 1.3.1.21 - 7-dehydrocholesterol reductase / Sterol Delta(7)-reductase Description:  7-dehydrocholesterol reductase-like protein
Genomic Order:  31 Name:  ? Medtr4g005450
Secondary Identifier:  ? PAC:31114287
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-2541 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g005450 0.5kb upstream 0.5kb upstream 4227 true chr4: 259097-263323 Medicago truncatula
Medtr4g005450 0.5kb upstream 0.5kb upstream 500 false chr4: 262824-263323 Medicago truncatula
Medtr4g005450 0.5kb downstream 0.5kb downstream 4227 true chr4: 258597-262823 Medicago truncatula
Medtr4g005450 0.5kb downstream 0.5kb downstream 500 false chr4: 258597-259096 Medicago truncatula
Medtr4g005450 1.0kb upstream 1.0kb upstream 4727 true chr4: 259097-263823 Medicago truncatula
Medtr4g005450 1.0kb upstream 1.0kb upstream 1000 false chr4: 262824-263823 Medicago truncatula
Medtr4g005450 1.0kb downstream 1.0kb downstream 4727 true chr4: 258097-262823 Medicago truncatula
Medtr4g005450 1.0kb downstream 1.0kb downstream 1000 false chr4: 258097-259096 Medicago truncatula
Medtr4g005450 2.0kb upstream 2.0kb upstream 5727 true chr4: 259097-264823 Medicago truncatula
Medtr4g005450 2.0kb upstream 2.0kb upstream 2000 false chr4: 262824-264823 Medicago truncatula
Medtr4g005450 2.0kb downstream 2.0kb downstream 5727 true chr4: 257097-262823 Medicago truncatula
Medtr4g005450 2.0kb downstream 2.0kb downstream 2000 false chr4: 257097-259096 Medicago truncatula
Medtr4g005450 5.0kb upstream 5.0kb upstream 8727 true chr4: 259097-267823 Medicago truncatula
Medtr4g005450 5.0kb upstream 5.0kb upstream 5000 false chr4: 262824-267823 Medicago truncatula
Medtr4g005450 5.0kb downstream 5.0kb downstream 8727 true chr4: 254097-262823 Medicago truncatula
Medtr4g005450 5.0kb downstream 5.0kb downstream 5000 false chr4: 254097-259096 Medicago truncatula
Medtr4g005450 10.0kb upstream 10.0kb upstream 13727 true chr4: 259097-272823 Medicago truncatula
Medtr4g005450 10.0kb upstream 10.0kb upstream 10000 false chr4: 262824-272823 Medicago truncatula
Medtr4g005450 10.0kb downstream 10.0kb downstream 13727 true chr4: 249097-262823 Medicago truncatula
Medtr4g005450 10.0kb downstream 10.0kb downstream 10000 false chr4: 249097-259096 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298824 5265 Fabidae View MSA
124062943 5270 Rosid View MSA
123743955 5271 Pentapetalae View MSA
122786047 5272 Eudicot View MSA
122044156 5273 Angiosperm View MSA
121351053 5274 Embryophyte View MSA
123426486 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.934        
cufflinks 3.423        
cufflinks 3.421        
cufflinks 2.578        
cufflinks 3.317        
cufflinks 0.774       Low
cufflinks 3.03        
cufflinks 3.454        
cufflinks 2.389        

0 Strain