Gene : Medtr4g005190 M. truncatula Mt4.0v1
Defline:  (1 of 12) 5.4.99.39 - Beta-amyrin synthase / 2,3-oxidosqualene beta-amyrin cyclase Description:  beta-amyrin synthase
Genomic Order:  10 Name:  ? Medtr4g005190
Secondary Identifier:  ? PAC:31108683
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5203 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g005190 0.5kb upstream 0.5kb upstream 7530 true chr4: 99768-107297 Medicago truncatula
Medtr4g005190 0.5kb upstream 0.5kb upstream 500 false chr4: 99768-100267 Medicago truncatula
Medtr4g005190 0.5kb downstream 0.5kb downstream 7530 true chr4: 100268-107797 Medicago truncatula
Medtr4g005190 0.5kb downstream 0.5kb downstream 500 false chr4: 107298-107797 Medicago truncatula
Medtr4g005190 1.0kb upstream 1.0kb upstream 8030 true chr4: 99268-107297 Medicago truncatula
Medtr4g005190 1.0kb upstream 1.0kb upstream 1000 false chr4: 99268-100267 Medicago truncatula
Medtr4g005190 1.0kb downstream 1.0kb downstream 8030 true chr4: 100268-108297 Medicago truncatula
Medtr4g005190 1.0kb downstream 1.0kb downstream 1000 false chr4: 107298-108297 Medicago truncatula
Medtr4g005190 2.0kb upstream 2.0kb upstream 9030 true chr4: 98268-107297 Medicago truncatula
Medtr4g005190 2.0kb upstream 2.0kb upstream 2000 false chr4: 98268-100267 Medicago truncatula
Medtr4g005190 2.0kb downstream 2.0kb downstream 9030 true chr4: 100268-109297 Medicago truncatula
Medtr4g005190 2.0kb downstream 2.0kb downstream 2000 false chr4: 107298-109297 Medicago truncatula
Medtr4g005190 5.0kb upstream 5.0kb upstream 12030 true chr4: 95268-107297 Medicago truncatula
Medtr4g005190 5.0kb upstream 5.0kb upstream 5000 false chr4: 95268-100267 Medicago truncatula
Medtr4g005190 5.0kb downstream 5.0kb downstream 12030 true chr4: 100268-112297 Medicago truncatula
Medtr4g005190 5.0kb downstream 5.0kb downstream 5000 false chr4: 107298-112297 Medicago truncatula
Medtr4g005190 10.0kb upstream 10.0kb upstream 17030 true chr4: 90268-107297 Medicago truncatula
Medtr4g005190 10.0kb upstream 10.0kb upstream 10000 false chr4: 90268-100267 Medicago truncatula
Medtr4g005190 10.0kb downstream 10.0kb downstream 17030 true chr4: 100268-117297 Medicago truncatula
Medtr4g005190 10.0kb downstream 10.0kb downstream 10000 false chr4: 107298-117297 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791741 5273 Angiosperm View MSA
122308588 5265 Fabidae View MSA
124062069 5270 Rosid View MSA
123738080 5271 Pentapetalae View MSA
122788516 5272 Eudicot View MSA
121063041 5274 Embryophyte View MSA
123102827 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.603       Low
cufflinks 2.776        
cufflinks 0.959        
cufflinks 0.977        
cufflinks 6.889       High
cufflinks 0.436       Low
cufflinks 1.897        
cufflinks 2.163        
cufflinks 8.02       High

0 Strain