Gene : Medtr4g005520 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF02325 - YGGT family (YGGT) Description:  YGGT family protein
Genomic Order:  36 Name:  ? Medtr4g005520
Secondary Identifier:  ? PAC:31112346
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g005520 0.5kb upstream 0.5kb upstream 2845 true chr4: 309407-312251 Medicago truncatula
Medtr4g005520 0.5kb upstream 0.5kb upstream 500 false chr4: 311752-312251 Medicago truncatula
Medtr4g005520 0.5kb downstream 0.5kb downstream 2845 true chr4: 308907-311751 Medicago truncatula
Medtr4g005520 0.5kb downstream 0.5kb downstream 500 false chr4: 308907-309406 Medicago truncatula
Medtr4g005520 1.0kb upstream 1.0kb upstream 3345 true chr4: 309407-312751 Medicago truncatula
Medtr4g005520 1.0kb upstream 1.0kb upstream 1000 false chr4: 311752-312751 Medicago truncatula
Medtr4g005520 1.0kb downstream 1.0kb downstream 3345 true chr4: 308407-311751 Medicago truncatula
Medtr4g005520 1.0kb downstream 1.0kb downstream 1000 false chr4: 308407-309406 Medicago truncatula
Medtr4g005520 2.0kb upstream 2.0kb upstream 4345 true chr4: 309407-313751 Medicago truncatula
Medtr4g005520 2.0kb upstream 2.0kb upstream 2000 false chr4: 311752-313751 Medicago truncatula
Medtr4g005520 2.0kb downstream 2.0kb downstream 4345 true chr4: 307407-311751 Medicago truncatula
Medtr4g005520 2.0kb downstream 2.0kb downstream 2000 false chr4: 307407-309406 Medicago truncatula
Medtr4g005520 5.0kb upstream 5.0kb upstream 7345 true chr4: 309407-316751 Medicago truncatula
Medtr4g005520 5.0kb upstream 5.0kb upstream 5000 false chr4: 311752-316751 Medicago truncatula
Medtr4g005520 5.0kb downstream 5.0kb downstream 7345 true chr4: 304407-311751 Medicago truncatula
Medtr4g005520 5.0kb downstream 5.0kb downstream 5000 false chr4: 304407-309406 Medicago truncatula
Medtr4g005520 10.0kb upstream 10.0kb upstream 12345 true chr4: 309407-321751 Medicago truncatula
Medtr4g005520 10.0kb upstream 10.0kb upstream 10000 false chr4: 311752-321751 Medicago truncatula
Medtr4g005520 10.0kb downstream 10.0kb downstream 12345 true chr4: 299407-311751 Medicago truncatula
Medtr4g005520 10.0kb downstream 10.0kb downstream 10000 false chr4: 299407-309406 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309420 5265 Fabidae View MSA
124073194 5270 Rosid View MSA
123747708 5271 Pentapetalae View MSA
122788477 5272 Eudicot View MSA
122044602 5273 Angiosperm View MSA
121348481 5274 Embryophyte View MSA
123428591 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.077     High  
cufflinks 35.642     High High
cufflinks 23.678     High  
cufflinks 14.425     High  
cufflinks 47.024     High High
cufflinks 6.739       Low
cufflinks 8.224        
cufflinks 34.917     High  
cufflinks 7.733       Low

0 Strain