Gene : Medtr4g006940 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10366//PTHR10366:SF467 - NAD DEPENDENT EPIMERASE/DEHYDRATASE Description:  cinnamoyl-CoA reductase-like protein
Genomic Order:  106 Name:  ? Medtr4g006940
Secondary Identifier:  ? PAC:31108887
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-361 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g006940 0.5kb upstream 0.5kb upstream 4505 true chr4: 862410-866914 Medicago truncatula
Medtr4g006940 0.5kb upstream 0.5kb upstream 500 false chr4: 862410-862909 Medicago truncatula
Medtr4g006940 0.5kb downstream 0.5kb downstream 4505 true chr4: 862910-867414 Medicago truncatula
Medtr4g006940 0.5kb downstream 0.5kb downstream 500 false chr4: 866915-867414 Medicago truncatula
Medtr4g006940 1.0kb upstream 1.0kb upstream 5005 true chr4: 861910-866914 Medicago truncatula
Medtr4g006940 1.0kb upstream 1.0kb upstream 1000 false chr4: 861910-862909 Medicago truncatula
Medtr4g006940 1.0kb downstream 1.0kb downstream 5005 true chr4: 862910-867914 Medicago truncatula
Medtr4g006940 1.0kb downstream 1.0kb downstream 1000 false chr4: 866915-867914 Medicago truncatula
Medtr4g006940 2.0kb upstream 2.0kb upstream 6005 true chr4: 860910-866914 Medicago truncatula
Medtr4g006940 2.0kb upstream 2.0kb upstream 2000 false chr4: 860910-862909 Medicago truncatula
Medtr4g006940 2.0kb downstream 2.0kb downstream 6005 true chr4: 862910-868914 Medicago truncatula
Medtr4g006940 2.0kb downstream 2.0kb downstream 2000 false chr4: 866915-868914 Medicago truncatula
Medtr4g006940 5.0kb upstream 5.0kb upstream 9005 true chr4: 857910-866914 Medicago truncatula
Medtr4g006940 5.0kb upstream 5.0kb upstream 5000 false chr4: 857910-862909 Medicago truncatula
Medtr4g006940 5.0kb downstream 5.0kb downstream 9005 true chr4: 862910-871914 Medicago truncatula
Medtr4g006940 5.0kb downstream 5.0kb downstream 5000 false chr4: 866915-871914 Medicago truncatula
Medtr4g006940 10.0kb upstream 10.0kb upstream 14005 true chr4: 852910-866914 Medicago truncatula
Medtr4g006940 10.0kb upstream 10.0kb upstream 10000 false chr4: 852910-862909 Medicago truncatula
Medtr4g006940 10.0kb downstream 10.0kb downstream 14005 true chr4: 862910-876914 Medicago truncatula
Medtr4g006940 10.0kb downstream 10.0kb downstream 10000 false chr4: 866915-876914 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041043 5273 Angiosperm View MSA
122310624 5265 Fabidae View MSA
124063767 5270 Rosid View MSA
123748181 5271 Pentapetalae View MSA
122792644 5272 Eudicot View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.59     High High
cufflinks 3.949        
cufflinks 5.399        
cufflinks 9.457     High  
cufflinks 2.075       Low
cufflinks 8.484        
cufflinks 35.947     High High
cufflinks 2.968       Low
cufflinks 35.902     High High

0 Strain