Gene : Medtr4g006730 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR19139:SF170 - AQUAPORIN NIP6-1 Description:  major intrinsic protein (MIP) family transporter
Genomic Order:  98 Name:  ? Medtr4g006730
Secondary Identifier:  ? PAC:31106674
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g006730 0.5kb upstream 0.5kb upstream 4637 true chr4: 773587-778223 Medicago truncatula
Medtr4g006730 0.5kb upstream 0.5kb upstream 500 false chr4: 777724-778223 Medicago truncatula
Medtr4g006730 0.5kb downstream 0.5kb downstream 4637 true chr4: 773087-777723 Medicago truncatula
Medtr4g006730 0.5kb downstream 0.5kb downstream 500 false chr4: 773087-773586 Medicago truncatula
Medtr4g006730 1.0kb upstream 1.0kb upstream 5137 true chr4: 773587-778723 Medicago truncatula
Medtr4g006730 1.0kb upstream 1.0kb upstream 1000 false chr4: 777724-778723 Medicago truncatula
Medtr4g006730 1.0kb downstream 1.0kb downstream 5137 true chr4: 772587-777723 Medicago truncatula
Medtr4g006730 1.0kb downstream 1.0kb downstream 1000 false chr4: 772587-773586 Medicago truncatula
Medtr4g006730 2.0kb upstream 2.0kb upstream 6137 true chr4: 773587-779723 Medicago truncatula
Medtr4g006730 2.0kb upstream 2.0kb upstream 2000 false chr4: 777724-779723 Medicago truncatula
Medtr4g006730 2.0kb downstream 2.0kb downstream 6137 true chr4: 771587-777723 Medicago truncatula
Medtr4g006730 2.0kb downstream 2.0kb downstream 2000 false chr4: 771587-773586 Medicago truncatula
Medtr4g006730 5.0kb upstream 5.0kb upstream 9137 true chr4: 773587-782723 Medicago truncatula
Medtr4g006730 5.0kb upstream 5.0kb upstream 5000 false chr4: 777724-782723 Medicago truncatula
Medtr4g006730 5.0kb downstream 5.0kb downstream 9137 true chr4: 768587-777723 Medicago truncatula
Medtr4g006730 5.0kb downstream 5.0kb downstream 5000 false chr4: 768587-773586 Medicago truncatula
Medtr4g006730 10.0kb upstream 10.0kb upstream 14137 true chr4: 773587-787723 Medicago truncatula
Medtr4g006730 10.0kb upstream 10.0kb upstream 10000 false chr4: 777724-787723 Medicago truncatula
Medtr4g006730 10.0kb downstream 10.0kb downstream 14137 true chr4: 763587-777723 Medicago truncatula
Medtr4g006730 10.0kb downstream 10.0kb downstream 10000 false chr4: 763587-773586 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315351 5265 Fabidae View MSA
124065491 5270 Rosid View MSA
123738627 5271 Pentapetalae View MSA
122786860 5272 Eudicot View MSA
122045957 5273 Angiosperm View MSA
121349244 5274 Embryophyte View MSA
123427856 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.021     Low Low
cufflinks 0.095        
cufflinks 0.016     Low Low
cufflinks 0.08        
cufflinks 0.171        
cufflinks 0.101     Low  
cufflinks 0.281        
cufflinks 0.056     Low  
cufflinks 1.021       High

0 Strain