Gene : Medtr4g007770 M. truncatula Mt4.0v1
Defline:  (1 of 209) PF00847 - AP2 domain (AP2) Description:  AP2-type transcription factor
Genomic Order:  164 Name:  ? Medtr4g007770
Secondary Identifier:  ? PAC:31114924
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g007770 0.5kb upstream 0.5kb upstream 6727 true chr4: 1228229-1234955 Medicago truncatula
Medtr4g007770 0.5kb upstream 0.5kb upstream 500 false chr4: 1228229-1228728 Medicago truncatula
Medtr4g007770 0.5kb downstream 0.5kb downstream 6727 true chr4: 1228729-1235455 Medicago truncatula
Medtr4g007770 0.5kb downstream 0.5kb downstream 500 false chr4: 1234956-1235455 Medicago truncatula
Medtr4g007770 1.0kb upstream 1.0kb upstream 7227 true chr4: 1227729-1234955 Medicago truncatula
Medtr4g007770 1.0kb upstream 1.0kb upstream 1000 false chr4: 1227729-1228728 Medicago truncatula
Medtr4g007770 1.0kb downstream 1.0kb downstream 7227 true chr4: 1228729-1235955 Medicago truncatula
Medtr4g007770 1.0kb downstream 1.0kb downstream 1000 false chr4: 1234956-1235955 Medicago truncatula
Medtr4g007770 2.0kb upstream 2.0kb upstream 8227 true chr4: 1226729-1234955 Medicago truncatula
Medtr4g007770 2.0kb upstream 2.0kb upstream 2000 false chr4: 1226729-1228728 Medicago truncatula
Medtr4g007770 2.0kb downstream 2.0kb downstream 8227 true chr4: 1228729-1236955 Medicago truncatula
Medtr4g007770 2.0kb downstream 2.0kb downstream 2000 false chr4: 1234956-1236955 Medicago truncatula
Medtr4g007770 5.0kb upstream 5.0kb upstream 11227 true chr4: 1223729-1234955 Medicago truncatula
Medtr4g007770 5.0kb upstream 5.0kb upstream 5000 false chr4: 1223729-1228728 Medicago truncatula
Medtr4g007770 5.0kb downstream 5.0kb downstream 11227 true chr4: 1228729-1239955 Medicago truncatula
Medtr4g007770 5.0kb downstream 5.0kb downstream 5000 false chr4: 1234956-1239955 Medicago truncatula
Medtr4g007770 10.0kb upstream 10.0kb upstream 16227 true chr4: 1218729-1234955 Medicago truncatula
Medtr4g007770 10.0kb upstream 10.0kb upstream 10000 false chr4: 1218729-1228728 Medicago truncatula
Medtr4g007770 10.0kb downstream 10.0kb downstream 16227 true chr4: 1228729-1244955 Medicago truncatula
Medtr4g007770 10.0kb downstream 10.0kb downstream 10000 false chr4: 1234956-1244955 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297114 5265 Fabidae View MSA
124061402 5270 Rosid View MSA
123744110 5271 Pentapetalae View MSA
122797615 5272 Eudicot View MSA
122048142 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121350345 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.038     Low Low
cufflinks 0.053     Low  
cufflinks 0.078        
cufflinks 0.085        
cufflinks 0.071        
cufflinks 0.049     Low  
cufflinks 0.129       High
cufflinks 0.061     Low  
cufflinks 0.12       High

0 Strain