Gene : Medtr4g009110 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11514//PTHR11514:SF48 - MYC Description:  helix loop helix DNA-binding domain protein
Genomic Order:  253 Name:  ? Medtr4g009110
Secondary Identifier:  ? PAC:31113543
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g009110 0.5kb upstream 0.5kb upstream 5514 true chr4: 1819727-1825240 Medicago truncatula
Medtr4g009110 0.5kb upstream 0.5kb upstream 500 false chr4: 1824741-1825240 Medicago truncatula
Medtr4g009110 0.5kb downstream 0.5kb downstream 5514 true chr4: 1819227-1824740 Medicago truncatula
Medtr4g009110 0.5kb downstream 0.5kb downstream 500 false chr4: 1819227-1819726 Medicago truncatula
Medtr4g009110 1.0kb upstream 1.0kb upstream 6014 true chr4: 1819727-1825740 Medicago truncatula
Medtr4g009110 1.0kb upstream 1.0kb upstream 1000 false chr4: 1824741-1825740 Medicago truncatula
Medtr4g009110 1.0kb downstream 1.0kb downstream 6014 true chr4: 1818727-1824740 Medicago truncatula
Medtr4g009110 1.0kb downstream 1.0kb downstream 1000 false chr4: 1818727-1819726 Medicago truncatula
Medtr4g009110 2.0kb upstream 2.0kb upstream 7014 true chr4: 1819727-1826740 Medicago truncatula
Medtr4g009110 2.0kb upstream 2.0kb upstream 2000 false chr4: 1824741-1826740 Medicago truncatula
Medtr4g009110 2.0kb downstream 2.0kb downstream 7014 true chr4: 1817727-1824740 Medicago truncatula
Medtr4g009110 2.0kb downstream 2.0kb downstream 2000 false chr4: 1817727-1819726 Medicago truncatula
Medtr4g009110 5.0kb upstream 5.0kb upstream 10014 true chr4: 1819727-1829740 Medicago truncatula
Medtr4g009110 5.0kb upstream 5.0kb upstream 5000 false chr4: 1824741-1829740 Medicago truncatula
Medtr4g009110 5.0kb downstream 5.0kb downstream 10014 true chr4: 1814727-1824740 Medicago truncatula
Medtr4g009110 5.0kb downstream 5.0kb downstream 5000 false chr4: 1814727-1819726 Medicago truncatula
Medtr4g009110 10.0kb upstream 10.0kb upstream 15014 true chr4: 1819727-1834740 Medicago truncatula
Medtr4g009110 10.0kb upstream 10.0kb upstream 10000 false chr4: 1824741-1834740 Medicago truncatula
Medtr4g009110 10.0kb downstream 10.0kb downstream 15014 true chr4: 1809727-1824740 Medicago truncatula
Medtr4g009110 10.0kb downstream 10.0kb downstream 10000 false chr4: 1809727-1819726 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297642 5265 Fabidae View MSA
124036098 5270 Rosid View MSA
123749435 5271 Pentapetalae View MSA
122795103 5272 Eudicot View MSA
122042005 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.378       Low
cufflinks 2.301        
cufflinks 0.5       Low
cufflinks 1.4        
cufflinks 0.781        
cufflinks 1.22        
cufflinks 2.453        
cufflinks 1.281        
cufflinks 5.374       High

0 Strain