Gene : Medtr4g008080 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10288:SF174 - RNA-BINDING KH DOMAIN-CONTAINING PROTEIN Description:  RNA-binding KH domain protein
Genomic Order:  186 Name:  ? Medtr4g008080
Secondary Identifier:  ? PAC:31106448
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g008080 0.5kb upstream 0.5kb upstream 4844 true chr4: 1379196-1384039 Medicago truncatula
Medtr4g008080 0.5kb upstream 0.5kb upstream 500 false chr4: 1379196-1379695 Medicago truncatula
Medtr4g008080 0.5kb downstream 0.5kb downstream 4844 true chr4: 1379696-1384539 Medicago truncatula
Medtr4g008080 0.5kb downstream 0.5kb downstream 500 false chr4: 1384040-1384539 Medicago truncatula
Medtr4g008080 1.0kb upstream 1.0kb upstream 5344 true chr4: 1378696-1384039 Medicago truncatula
Medtr4g008080 1.0kb upstream 1.0kb upstream 1000 false chr4: 1378696-1379695 Medicago truncatula
Medtr4g008080 1.0kb downstream 1.0kb downstream 5344 true chr4: 1379696-1385039 Medicago truncatula
Medtr4g008080 1.0kb downstream 1.0kb downstream 1000 false chr4: 1384040-1385039 Medicago truncatula
Medtr4g008080 2.0kb upstream 2.0kb upstream 6344 true chr4: 1377696-1384039 Medicago truncatula
Medtr4g008080 2.0kb upstream 2.0kb upstream 2000 false chr4: 1377696-1379695 Medicago truncatula
Medtr4g008080 2.0kb downstream 2.0kb downstream 6344 true chr4: 1379696-1386039 Medicago truncatula
Medtr4g008080 2.0kb downstream 2.0kb downstream 2000 false chr4: 1384040-1386039 Medicago truncatula
Medtr4g008080 5.0kb upstream 5.0kb upstream 9344 true chr4: 1374696-1384039 Medicago truncatula
Medtr4g008080 5.0kb upstream 5.0kb upstream 5000 false chr4: 1374696-1379695 Medicago truncatula
Medtr4g008080 5.0kb downstream 5.0kb downstream 9344 true chr4: 1379696-1389039 Medicago truncatula
Medtr4g008080 5.0kb downstream 5.0kb downstream 5000 false chr4: 1384040-1389039 Medicago truncatula
Medtr4g008080 10.0kb upstream 10.0kb upstream 14344 true chr4: 1369696-1384039 Medicago truncatula
Medtr4g008080 10.0kb upstream 10.0kb upstream 10000 false chr4: 1369696-1379695 Medicago truncatula
Medtr4g008080 10.0kb downstream 10.0kb downstream 14344 true chr4: 1379696-1394039 Medicago truncatula
Medtr4g008080 10.0kb downstream 10.0kb downstream 10000 false chr4: 1384040-1394039 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305657 5265 Fabidae View MSA
124071830 5270 Rosid View MSA
123744817 5271 Pentapetalae View MSA
122797103 5272 Eudicot View MSA
122049280 5273 Angiosperm View MSA
121348372 5274 Embryophyte View MSA
123428845 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.0        
cufflinks 3.262        
cufflinks 3.839       High
cufflinks 2.507        
cufflinks 4.065       High
cufflinks 1.738       Low
cufflinks 2.9        
cufflinks 3.425        
cufflinks 2.764        

0 Strain