Gene : Medtr4g010050 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR11564:SF5 - SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN Description:  signal recognition particle 54 kDa protein
Genomic Order:  291 Name:  ? Medtr4g010050
Secondary Identifier:  ? PAC:31107810
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g010050 0.5kb upstream 0.5kb upstream 6785 true chr4: 2201607-2208391 Medicago truncatula
Medtr4g010050 0.5kb upstream 0.5kb upstream 500 false chr4: 2207892-2208391 Medicago truncatula
Medtr4g010050 0.5kb downstream 0.5kb downstream 6785 true chr4: 2201107-2207891 Medicago truncatula
Medtr4g010050 0.5kb downstream 0.5kb downstream 500 false chr4: 2201107-2201606 Medicago truncatula
Medtr4g010050 1.0kb upstream 1.0kb upstream 7285 true chr4: 2201607-2208891 Medicago truncatula
Medtr4g010050 1.0kb upstream 1.0kb upstream 1000 false chr4: 2207892-2208891 Medicago truncatula
Medtr4g010050 1.0kb downstream 1.0kb downstream 7285 true chr4: 2200607-2207891 Medicago truncatula
Medtr4g010050 1.0kb downstream 1.0kb downstream 1000 false chr4: 2200607-2201606 Medicago truncatula
Medtr4g010050 2.0kb upstream 2.0kb upstream 8285 true chr4: 2201607-2209891 Medicago truncatula
Medtr4g010050 2.0kb upstream 2.0kb upstream 2000 false chr4: 2207892-2209891 Medicago truncatula
Medtr4g010050 2.0kb downstream 2.0kb downstream 8285 true chr4: 2199607-2207891 Medicago truncatula
Medtr4g010050 2.0kb downstream 2.0kb downstream 2000 false chr4: 2199607-2201606 Medicago truncatula
Medtr4g010050 5.0kb upstream 5.0kb upstream 11285 true chr4: 2201607-2212891 Medicago truncatula
Medtr4g010050 5.0kb upstream 5.0kb upstream 5000 false chr4: 2207892-2212891 Medicago truncatula
Medtr4g010050 5.0kb downstream 5.0kb downstream 11285 true chr4: 2196607-2207891 Medicago truncatula
Medtr4g010050 5.0kb downstream 5.0kb downstream 5000 false chr4: 2196607-2201606 Medicago truncatula
Medtr4g010050 10.0kb upstream 10.0kb upstream 16285 true chr4: 2201607-2217891 Medicago truncatula
Medtr4g010050 10.0kb upstream 10.0kb upstream 10000 false chr4: 2207892-2217891 Medicago truncatula
Medtr4g010050 10.0kb downstream 10.0kb downstream 16285 true chr4: 2191607-2207891 Medicago truncatula
Medtr4g010050 10.0kb downstream 10.0kb downstream 10000 false chr4: 2191607-2201606 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308589 5265 Fabidae View MSA
124067958 5270 Rosid View MSA
123743632 5271 Pentapetalae View MSA
122786990 5272 Eudicot View MSA
122048939 5273 Angiosperm View MSA
121348760 5274 Embryophyte View MSA
123426502 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.487     High High
cufflinks 11.99     High  
cufflinks 10.007     High  
cufflinks 7.015       Low
cufflinks 13.268     High  
cufflinks 5.84       Low
cufflinks 10.35     High  
cufflinks 9.955     High  
cufflinks 12.917     High  

0 Strain