Gene : Medtr4g009880 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10108:SF24 - 2-METHOXY-6-POLYPRENYL-1,4-BENZOQUINOL METHYLASE, MITOCHONDRIAL Description:  2-methoxy-6-polyprenyl-1,4-benzoquinol methylase
Genomic Order:  282 Name:  ? Medtr4g009880
Secondary Identifier:  ? PAC:31112221
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5871 Medicago truncatula pathologic  
Mtruncatula PWY-5872 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g009880 0.5kb upstream 0.5kb upstream 5299 true chr4: 2106663-2111961 Medicago truncatula
Medtr4g009880 0.5kb upstream 0.5kb upstream 500 false chr4: 2111462-2111961 Medicago truncatula
Medtr4g009880 0.5kb downstream 0.5kb downstream 5299 true chr4: 2106163-2111461 Medicago truncatula
Medtr4g009880 0.5kb downstream 0.5kb downstream 500 false chr4: 2106163-2106662 Medicago truncatula
Medtr4g009880 1.0kb upstream 1.0kb upstream 5799 true chr4: 2106663-2112461 Medicago truncatula
Medtr4g009880 1.0kb upstream 1.0kb upstream 1000 false chr4: 2111462-2112461 Medicago truncatula
Medtr4g009880 1.0kb downstream 1.0kb downstream 5799 true chr4: 2105663-2111461 Medicago truncatula
Medtr4g009880 1.0kb downstream 1.0kb downstream 1000 false chr4: 2105663-2106662 Medicago truncatula
Medtr4g009880 2.0kb upstream 2.0kb upstream 6799 true chr4: 2106663-2113461 Medicago truncatula
Medtr4g009880 2.0kb upstream 2.0kb upstream 2000 false chr4: 2111462-2113461 Medicago truncatula
Medtr4g009880 2.0kb downstream 2.0kb downstream 6799 true chr4: 2104663-2111461 Medicago truncatula
Medtr4g009880 2.0kb downstream 2.0kb downstream 2000 false chr4: 2104663-2106662 Medicago truncatula
Medtr4g009880 5.0kb upstream 5.0kb upstream 9799 true chr4: 2106663-2116461 Medicago truncatula
Medtr4g009880 5.0kb upstream 5.0kb upstream 5000 false chr4: 2111462-2116461 Medicago truncatula
Medtr4g009880 5.0kb downstream 5.0kb downstream 9799 true chr4: 2101663-2111461 Medicago truncatula
Medtr4g009880 5.0kb downstream 5.0kb downstream 5000 false chr4: 2101663-2106662 Medicago truncatula
Medtr4g009880 10.0kb upstream 10.0kb upstream 14799 true chr4: 2106663-2121461 Medicago truncatula
Medtr4g009880 10.0kb upstream 10.0kb upstream 10000 false chr4: 2111462-2121461 Medicago truncatula
Medtr4g009880 10.0kb downstream 10.0kb downstream 14799 true chr4: 2096663-2111461 Medicago truncatula
Medtr4g009880 10.0kb downstream 10.0kb downstream 10000 false chr4: 2096663-2106662 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041148 5273 Angiosperm View MSA
122302276 5265 Fabidae View MSA
124067327 5270 Rosid View MSA
123738515 5271 Pentapetalae View MSA
122789797 5272 Eudicot View MSA
121350692 5274 Embryophyte View MSA
123428356 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.69        
cufflinks 6.459        
cufflinks 11.087     High High
cufflinks 4.086       Low
cufflinks 7.101        
cufflinks 4.806        
cufflinks 5.882        
cufflinks 8.367        
cufflinks 4.072       Low

0 Strain