Gene : Medtr4g009840 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Description:  topless-like protein
Genomic Order:  277 Name:  ? Medtr4g009840
Secondary Identifier:  ? PAC:31111021
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g009840 0.5kb upstream 0.5kb upstream 9091 true chr4: 2076721-2085811 Medicago truncatula
Medtr4g009840 0.5kb upstream 0.5kb upstream 500 false chr4: 2076721-2077220 Medicago truncatula
Medtr4g009840 0.5kb downstream 0.5kb downstream 9091 true chr4: 2077221-2086311 Medicago truncatula
Medtr4g009840 0.5kb downstream 0.5kb downstream 500 false chr4: 2085812-2086311 Medicago truncatula
Medtr4g009840 1.0kb upstream 1.0kb upstream 9591 true chr4: 2076221-2085811 Medicago truncatula
Medtr4g009840 1.0kb upstream 1.0kb upstream 1000 false chr4: 2076221-2077220 Medicago truncatula
Medtr4g009840 1.0kb downstream 1.0kb downstream 9591 true chr4: 2077221-2086811 Medicago truncatula
Medtr4g009840 1.0kb downstream 1.0kb downstream 1000 false chr4: 2085812-2086811 Medicago truncatula
Medtr4g009840 2.0kb upstream 2.0kb upstream 10591 true chr4: 2075221-2085811 Medicago truncatula
Medtr4g009840 2.0kb upstream 2.0kb upstream 2000 false chr4: 2075221-2077220 Medicago truncatula
Medtr4g009840 2.0kb downstream 2.0kb downstream 10591 true chr4: 2077221-2087811 Medicago truncatula
Medtr4g009840 2.0kb downstream 2.0kb downstream 2000 false chr4: 2085812-2087811 Medicago truncatula
Medtr4g009840 5.0kb upstream 5.0kb upstream 13591 true chr4: 2072221-2085811 Medicago truncatula
Medtr4g009840 5.0kb upstream 5.0kb upstream 5000 false chr4: 2072221-2077220 Medicago truncatula
Medtr4g009840 5.0kb downstream 5.0kb downstream 13591 true chr4: 2077221-2090811 Medicago truncatula
Medtr4g009840 5.0kb downstream 5.0kb downstream 5000 false chr4: 2085812-2090811 Medicago truncatula
Medtr4g009840 10.0kb upstream 10.0kb upstream 18591 true chr4: 2067221-2085811 Medicago truncatula
Medtr4g009840 10.0kb upstream 10.0kb upstream 10000 false chr4: 2067221-2077220 Medicago truncatula
Medtr4g009840 10.0kb downstream 10.0kb downstream 18591 true chr4: 2077221-2095811 Medicago truncatula
Medtr4g009840 10.0kb downstream 10.0kb downstream 10000 false chr4: 2085812-2095811 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309385 5265 Fabidae View MSA
124063339 5270 Rosid View MSA
123747741 5271 Pentapetalae View MSA
122790823 5272 Eudicot View MSA
122049559 5273 Angiosperm View MSA
121350875 5274 Embryophyte View MSA
123381918 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.678     High  
cufflinks 21.26     High High
cufflinks 18.209     High  
cufflinks 4.854       Low
cufflinks 16.402     High  
cufflinks 3.232       Low
cufflinks 9.848        
cufflinks 14.283     High  
cufflinks 11.059     High  

0 Strain