Gene : Medtr4g011300 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF04003//PF13360 - Dip2/Utp12 Family (Utp12) // PQQ-like domain (PQQ_2) Description:  transducin family protein/WD-40 repeat protein, putative
Genomic Order:  373 Name:  ? Medtr4g011300
Secondary Identifier:  ? PAC:31108498
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g011300 0.5kb upstream 0.5kb upstream 8289 true chr4: 2695734-2704022 Medicago truncatula
Medtr4g011300 0.5kb upstream 0.5kb upstream 500 false chr4: 2703523-2704022 Medicago truncatula
Medtr4g011300 0.5kb downstream 0.5kb downstream 8289 true chr4: 2695234-2703522 Medicago truncatula
Medtr4g011300 0.5kb downstream 0.5kb downstream 500 false chr4: 2695234-2695733 Medicago truncatula
Medtr4g011300 1.0kb upstream 1.0kb upstream 8789 true chr4: 2695734-2704522 Medicago truncatula
Medtr4g011300 1.0kb upstream 1.0kb upstream 1000 false chr4: 2703523-2704522 Medicago truncatula
Medtr4g011300 1.0kb downstream 1.0kb downstream 8789 true chr4: 2694734-2703522 Medicago truncatula
Medtr4g011300 1.0kb downstream 1.0kb downstream 1000 false chr4: 2694734-2695733 Medicago truncatula
Medtr4g011300 2.0kb upstream 2.0kb upstream 9789 true chr4: 2695734-2705522 Medicago truncatula
Medtr4g011300 2.0kb upstream 2.0kb upstream 2000 false chr4: 2703523-2705522 Medicago truncatula
Medtr4g011300 2.0kb downstream 2.0kb downstream 9789 true chr4: 2693734-2703522 Medicago truncatula
Medtr4g011300 2.0kb downstream 2.0kb downstream 2000 false chr4: 2693734-2695733 Medicago truncatula
Medtr4g011300 5.0kb upstream 5.0kb upstream 12789 true chr4: 2695734-2708522 Medicago truncatula
Medtr4g011300 5.0kb upstream 5.0kb upstream 5000 false chr4: 2703523-2708522 Medicago truncatula
Medtr4g011300 5.0kb downstream 5.0kb downstream 12789 true chr4: 2690734-2703522 Medicago truncatula
Medtr4g011300 5.0kb downstream 5.0kb downstream 5000 false chr4: 2690734-2695733 Medicago truncatula
Medtr4g011300 10.0kb upstream 10.0kb upstream 17789 true chr4: 2695734-2713522 Medicago truncatula
Medtr4g011300 10.0kb upstream 10.0kb upstream 10000 false chr4: 2703523-2713522 Medicago truncatula
Medtr4g011300 10.0kb downstream 10.0kb downstream 17789 true chr4: 2685734-2703522 Medicago truncatula
Medtr4g011300 10.0kb downstream 10.0kb downstream 10000 false chr4: 2685734-2695733 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297563 5265 Fabidae View MSA
124070647 5270 Rosid View MSA
123742846 5271 Pentapetalae View MSA
122770409 5272 Eudicot View MSA
122048492 5273 Angiosperm View MSA
121346834 5274 Embryophyte View MSA
123423807 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.432        
cufflinks 1.385        
cufflinks 1.795        
cufflinks 0.677       Low
cufflinks 2.459       High
cufflinks 0.48       Low
cufflinks 1.18        
cufflinks 1.805        
cufflinks 1.064        

0 Strain