Gene : Medtr4g011880 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31734:SF12 - AUXIN-RESPONSIVE PROTEIN IAA19-RELATED Description:  auxin-responsive AUX/IAA family protein
Genomic Order:  413 Name:  ? Medtr4g011880
Secondary Identifier:  ? PAC:31115269
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g011880 0.5kb upstream 0.5kb upstream 4678 true chr4: 3037433-3042110 Medicago truncatula
Medtr4g011880 0.5kb upstream 0.5kb upstream 500 false chr4: 3041611-3042110 Medicago truncatula
Medtr4g011880 0.5kb downstream 0.5kb downstream 4678 true chr4: 3036933-3041610 Medicago truncatula
Medtr4g011880 0.5kb downstream 0.5kb downstream 500 false chr4: 3036933-3037432 Medicago truncatula
Medtr4g011880 1.0kb upstream 1.0kb upstream 5178 true chr4: 3037433-3042610 Medicago truncatula
Medtr4g011880 1.0kb upstream 1.0kb upstream 1000 false chr4: 3041611-3042610 Medicago truncatula
Medtr4g011880 1.0kb downstream 1.0kb downstream 5178 true chr4: 3036433-3041610 Medicago truncatula
Medtr4g011880 1.0kb downstream 1.0kb downstream 1000 false chr4: 3036433-3037432 Medicago truncatula
Medtr4g011880 2.0kb upstream 2.0kb upstream 6178 true chr4: 3037433-3043610 Medicago truncatula
Medtr4g011880 2.0kb upstream 2.0kb upstream 2000 false chr4: 3041611-3043610 Medicago truncatula
Medtr4g011880 2.0kb downstream 2.0kb downstream 6178 true chr4: 3035433-3041610 Medicago truncatula
Medtr4g011880 2.0kb downstream 2.0kb downstream 2000 false chr4: 3035433-3037432 Medicago truncatula
Medtr4g011880 5.0kb upstream 5.0kb upstream 9178 true chr4: 3037433-3046610 Medicago truncatula
Medtr4g011880 5.0kb upstream 5.0kb upstream 5000 false chr4: 3041611-3046610 Medicago truncatula
Medtr4g011880 5.0kb downstream 5.0kb downstream 9178 true chr4: 3032433-3041610 Medicago truncatula
Medtr4g011880 5.0kb downstream 5.0kb downstream 5000 false chr4: 3032433-3037432 Medicago truncatula
Medtr4g011880 10.0kb upstream 10.0kb upstream 14178 true chr4: 3037433-3051610 Medicago truncatula
Medtr4g011880 10.0kb upstream 10.0kb upstream 10000 false chr4: 3041611-3051610 Medicago truncatula
Medtr4g011880 10.0kb downstream 10.0kb downstream 14178 true chr4: 3027433-3041610 Medicago truncatula
Medtr4g011880 10.0kb downstream 10.0kb downstream 10000 false chr4: 3027433-3037432 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310138 5265 Fabidae View MSA
124060642 5270 Rosid View MSA
123747255 5271 Pentapetalae View MSA
122788195 5272 Eudicot View MSA
122050292 5273 Angiosperm View MSA
121311842 5274 Embryophyte View MSA
123349083 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.009     Low Low
cufflinks 1.363        
cufflinks 2.533        
cufflinks 0.283        
cufflinks 2.201        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.431        
cufflinks 1.446        
cufflinks 0.774        

0 Strain