Gene : Medtr3g463900 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11071//PTHR11071:SF291 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Description:  peptidyl-prolyl cis-trans isomerase
Genomic Order:  2713 Name:  ? Medtr3g463900
Secondary Identifier:  ? PAC:31057409
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g463900 0.5kb upstream 0.5kb upstream 4378 true chr3: 25640419-25644796 Medicago truncatula
Medtr3g463900 0.5kb upstream 0.5kb upstream 500 false chr3: 25644297-25644796 Medicago truncatula
Medtr3g463900 0.5kb downstream 0.5kb downstream 4378 true chr3: 25639919-25644296 Medicago truncatula
Medtr3g463900 0.5kb downstream 0.5kb downstream 500 false chr3: 25639919-25640418 Medicago truncatula
Medtr3g463900 1.0kb upstream 1.0kb upstream 4878 true chr3: 25640419-25645296 Medicago truncatula
Medtr3g463900 1.0kb upstream 1.0kb upstream 1000 false chr3: 25644297-25645296 Medicago truncatula
Medtr3g463900 1.0kb downstream 1.0kb downstream 4878 true chr3: 25639419-25644296 Medicago truncatula
Medtr3g463900 1.0kb downstream 1.0kb downstream 1000 false chr3: 25639419-25640418 Medicago truncatula
Medtr3g463900 2.0kb upstream 2.0kb upstream 5878 true chr3: 25640419-25646296 Medicago truncatula
Medtr3g463900 2.0kb upstream 2.0kb upstream 2000 false chr3: 25644297-25646296 Medicago truncatula
Medtr3g463900 2.0kb downstream 2.0kb downstream 5878 true chr3: 25638419-25644296 Medicago truncatula
Medtr3g463900 2.0kb downstream 2.0kb downstream 2000 false chr3: 25638419-25640418 Medicago truncatula
Medtr3g463900 5.0kb upstream 5.0kb upstream 8878 true chr3: 25640419-25649296 Medicago truncatula
Medtr3g463900 5.0kb upstream 5.0kb upstream 5000 false chr3: 25644297-25649296 Medicago truncatula
Medtr3g463900 5.0kb downstream 5.0kb downstream 8878 true chr3: 25635419-25644296 Medicago truncatula
Medtr3g463900 5.0kb downstream 5.0kb downstream 5000 false chr3: 25635419-25640418 Medicago truncatula
Medtr3g463900 10.0kb upstream 10.0kb upstream 13878 true chr3: 25640419-25654296 Medicago truncatula
Medtr3g463900 10.0kb upstream 10.0kb upstream 10000 false chr3: 25644297-25654296 Medicago truncatula
Medtr3g463900 10.0kb downstream 10.0kb downstream 13878 true chr3: 25630419-25644296 Medicago truncatula
Medtr3g463900 10.0kb downstream 10.0kb downstream 10000 false chr3: 25630419-25640418 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307029 5265 Fabidae View MSA
124063995 5270 Rosid View MSA
123745258 5271 Pentapetalae View MSA
122785870 5272 Eudicot View MSA
122041792 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121346769 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.668     High  
cufflinks 19.344     High  
cufflinks 13.431     High  
cufflinks 11.399     High  
cufflinks 27.934     High  
cufflinks 7.037       Low
cufflinks 29.399     High  
cufflinks 13.54     High  
cufflinks 31.444     High High

0 Strain