Gene : Medtr3g464330 M. truncatula Mt4.0v1
Defline:  (1 of 6) PF11960 - Domain of unknown function (DUF3474) (DUF3474) Description:  microsomal omega-3 fatty acid desaturase
Genomic Order:  2742 Name:  ? Medtr3g464330
Secondary Identifier:  ? PAC:31055838
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g464330 0.5kb upstream 0.5kb upstream 4953 true chr3: 25836811-25841763 Medicago truncatula
Medtr3g464330 0.5kb upstream 0.5kb upstream 500 false chr3: 25841264-25841763 Medicago truncatula
Medtr3g464330 0.5kb downstream 0.5kb downstream 4953 true chr3: 25836311-25841263 Medicago truncatula
Medtr3g464330 0.5kb downstream 0.5kb downstream 500 false chr3: 25836311-25836810 Medicago truncatula
Medtr3g464330 1.0kb upstream 1.0kb upstream 5453 true chr3: 25836811-25842263 Medicago truncatula
Medtr3g464330 1.0kb upstream 1.0kb upstream 1000 false chr3: 25841264-25842263 Medicago truncatula
Medtr3g464330 1.0kb downstream 1.0kb downstream 5453 true chr3: 25835811-25841263 Medicago truncatula
Medtr3g464330 1.0kb downstream 1.0kb downstream 1000 false chr3: 25835811-25836810 Medicago truncatula
Medtr3g464330 2.0kb upstream 2.0kb upstream 6453 true chr3: 25836811-25843263 Medicago truncatula
Medtr3g464330 2.0kb upstream 2.0kb upstream 2000 false chr3: 25841264-25843263 Medicago truncatula
Medtr3g464330 2.0kb downstream 2.0kb downstream 6453 true chr3: 25834811-25841263 Medicago truncatula
Medtr3g464330 2.0kb downstream 2.0kb downstream 2000 false chr3: 25834811-25836810 Medicago truncatula
Medtr3g464330 5.0kb upstream 5.0kb upstream 9453 true chr3: 25836811-25846263 Medicago truncatula
Medtr3g464330 5.0kb upstream 5.0kb upstream 5000 false chr3: 25841264-25846263 Medicago truncatula
Medtr3g464330 5.0kb downstream 5.0kb downstream 9453 true chr3: 25831811-25841263 Medicago truncatula
Medtr3g464330 5.0kb downstream 5.0kb downstream 5000 false chr3: 25831811-25836810 Medicago truncatula
Medtr3g464330 10.0kb upstream 10.0kb upstream 14453 true chr3: 25836811-25851263 Medicago truncatula
Medtr3g464330 10.0kb upstream 10.0kb upstream 10000 false chr3: 25841264-25851263 Medicago truncatula
Medtr3g464330 10.0kb downstream 10.0kb downstream 14453 true chr3: 25826811-25841263 Medicago truncatula
Medtr3g464330 10.0kb downstream 10.0kb downstream 10000 false chr3: 25826811-25836810 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313577 5265 Fabidae View MSA
124072004 5270 Rosid View MSA
123752062 5271 Pentapetalae View MSA
122788316 5272 Eudicot View MSA
122045494 5273 Angiosperm View MSA
121344489 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.019        
cufflinks 6.683        
cufflinks 5.037        
cufflinks 1.773        
cufflinks 9.03        
cufflinks 0.412       Low
cufflinks 4.075        
cufflinks 5.724        
cufflinks 5.748        

0 Strain