Gene : Medtr3g465040 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG2612 - Predicted integral membrane protein Description:  Sgf11 (transcriptional regulation protein) protein
Genomic Order:  2790 Name:  ? Medtr3g465040
Secondary Identifier:  ? PAC:31057110
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g465040 0.5kb upstream 0.5kb upstream 4697 true chr3: 26286922-26291618 Medicago truncatula
Medtr3g465040 0.5kb upstream 0.5kb upstream 500 false chr3: 26291119-26291618 Medicago truncatula
Medtr3g465040 0.5kb downstream 0.5kb downstream 4697 true chr3: 26286422-26291118 Medicago truncatula
Medtr3g465040 0.5kb downstream 0.5kb downstream 500 false chr3: 26286422-26286921 Medicago truncatula
Medtr3g465040 1.0kb upstream 1.0kb upstream 5197 true chr3: 26286922-26292118 Medicago truncatula
Medtr3g465040 1.0kb upstream 1.0kb upstream 1000 false chr3: 26291119-26292118 Medicago truncatula
Medtr3g465040 1.0kb downstream 1.0kb downstream 5197 true chr3: 26285922-26291118 Medicago truncatula
Medtr3g465040 1.0kb downstream 1.0kb downstream 1000 false chr3: 26285922-26286921 Medicago truncatula
Medtr3g465040 2.0kb upstream 2.0kb upstream 6197 true chr3: 26286922-26293118 Medicago truncatula
Medtr3g465040 2.0kb upstream 2.0kb upstream 2000 false chr3: 26291119-26293118 Medicago truncatula
Medtr3g465040 2.0kb downstream 2.0kb downstream 6197 true chr3: 26284922-26291118 Medicago truncatula
Medtr3g465040 2.0kb downstream 2.0kb downstream 2000 false chr3: 26284922-26286921 Medicago truncatula
Medtr3g465040 5.0kb upstream 5.0kb upstream 9197 true chr3: 26286922-26296118 Medicago truncatula
Medtr3g465040 5.0kb upstream 5.0kb upstream 5000 false chr3: 26291119-26296118 Medicago truncatula
Medtr3g465040 5.0kb downstream 5.0kb downstream 9197 true chr3: 26281922-26291118 Medicago truncatula
Medtr3g465040 5.0kb downstream 5.0kb downstream 5000 false chr3: 26281922-26286921 Medicago truncatula
Medtr3g465040 10.0kb upstream 10.0kb upstream 14197 true chr3: 26286922-26301118 Medicago truncatula
Medtr3g465040 10.0kb upstream 10.0kb upstream 10000 false chr3: 26291119-26301118 Medicago truncatula
Medtr3g465040 10.0kb downstream 10.0kb downstream 14197 true chr3: 26276922-26291118 Medicago truncatula
Medtr3g465040 10.0kb downstream 10.0kb downstream 10000 false chr3: 26276922-26286921 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301384 5265 Fabidae View MSA
124065266 5270 Rosid View MSA
123740415 5271 Pentapetalae View MSA
122791070 5272 Eudicot View MSA
122047001 5273 Angiosperm View MSA
121343910 5274 Embryophyte View MSA
123425700 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.368        
cufflinks 1.727        
cufflinks 1.502        
cufflinks 1.202        
cufflinks 1.38        
cufflinks 0.12     Low Low
cufflinks 1.032        
cufflinks 1.653        
cufflinks 1.158        

0 Strain