Gene : Medtr3g466830 M. truncatula Mt4.0v1
Defline:  (1 of 33) PTHR11945:SF183 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL80-RELATED Description:  MADS-box transcription factor family protein
Genomic Order:  2948 Name:  ? Medtr3g466830
Secondary Identifier:  ? PAC:31056391
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g466830 0.5kb upstream 0.5kb upstream 986 true chr3: 27518207-27519192 Medicago truncatula
Medtr3g466830 0.5kb upstream 0.5kb upstream 500 false chr3: 27518693-27519192 Medicago truncatula
Medtr3g466830 0.5kb downstream 0.5kb downstream 986 true chr3: 27517707-27518692 Medicago truncatula
Medtr3g466830 0.5kb downstream 0.5kb downstream 500 false chr3: 27517707-27518206 Medicago truncatula
Medtr3g466830 1.0kb upstream 1.0kb upstream 1486 true chr3: 27518207-27519692 Medicago truncatula
Medtr3g466830 1.0kb upstream 1.0kb upstream 1000 false chr3: 27518693-27519692 Medicago truncatula
Medtr3g466830 1.0kb downstream 1.0kb downstream 1486 true chr3: 27517207-27518692 Medicago truncatula
Medtr3g466830 1.0kb downstream 1.0kb downstream 1000 false chr3: 27517207-27518206 Medicago truncatula
Medtr3g466830 2.0kb upstream 2.0kb upstream 2486 true chr3: 27518207-27520692 Medicago truncatula
Medtr3g466830 2.0kb upstream 2.0kb upstream 2000 false chr3: 27518693-27520692 Medicago truncatula
Medtr3g466830 2.0kb downstream 2.0kb downstream 2486 true chr3: 27516207-27518692 Medicago truncatula
Medtr3g466830 2.0kb downstream 2.0kb downstream 2000 false chr3: 27516207-27518206 Medicago truncatula
Medtr3g466830 5.0kb upstream 5.0kb upstream 5486 true chr3: 27518207-27523692 Medicago truncatula
Medtr3g466830 5.0kb upstream 5.0kb upstream 5000 false chr3: 27518693-27523692 Medicago truncatula
Medtr3g466830 5.0kb downstream 5.0kb downstream 5486 true chr3: 27513207-27518692 Medicago truncatula
Medtr3g466830 5.0kb downstream 5.0kb downstream 5000 false chr3: 27513207-27518206 Medicago truncatula
Medtr3g466830 10.0kb upstream 10.0kb upstream 10486 true chr3: 27518207-27528692 Medicago truncatula
Medtr3g466830 10.0kb upstream 10.0kb upstream 10000 false chr3: 27518693-27528692 Medicago truncatula
Medtr3g466830 10.0kb downstream 10.0kb downstream 10486 true chr3: 27508207-27518692 Medicago truncatula
Medtr3g466830 10.0kb downstream 10.0kb downstream 10000 false chr3: 27508207-27518206 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315745 5265 Fabidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain