Gene : Medtr3g466890 M. truncatula Mt4.0v1
Defline:  (1 of 33) PTHR11945:SF183 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL80-RELATED Description:  MADS-box transcription factor family protein
Genomic Order:  2951 Name:  ? Medtr3g466890
Secondary Identifier:  ? PAC:31058250
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g466890 0.5kb upstream 0.5kb upstream 986 true chr3: 27530284-27531269 Medicago truncatula
Medtr3g466890 0.5kb upstream 0.5kb upstream 500 false chr3: 27530770-27531269 Medicago truncatula
Medtr3g466890 0.5kb downstream 0.5kb downstream 986 true chr3: 27529784-27530769 Medicago truncatula
Medtr3g466890 0.5kb downstream 0.5kb downstream 500 false chr3: 27529784-27530283 Medicago truncatula
Medtr3g466890 1.0kb upstream 1.0kb upstream 1486 true chr3: 27530284-27531769 Medicago truncatula
Medtr3g466890 1.0kb upstream 1.0kb upstream 1000 false chr3: 27530770-27531769 Medicago truncatula
Medtr3g466890 1.0kb downstream 1.0kb downstream 1486 true chr3: 27529284-27530769 Medicago truncatula
Medtr3g466890 1.0kb downstream 1.0kb downstream 1000 false chr3: 27529284-27530283 Medicago truncatula
Medtr3g466890 2.0kb upstream 2.0kb upstream 2486 true chr3: 27530284-27532769 Medicago truncatula
Medtr3g466890 2.0kb upstream 2.0kb upstream 2000 false chr3: 27530770-27532769 Medicago truncatula
Medtr3g466890 2.0kb downstream 2.0kb downstream 2486 true chr3: 27528284-27530769 Medicago truncatula
Medtr3g466890 2.0kb downstream 2.0kb downstream 2000 false chr3: 27528284-27530283 Medicago truncatula
Medtr3g466890 5.0kb upstream 5.0kb upstream 5486 true chr3: 27530284-27535769 Medicago truncatula
Medtr3g466890 5.0kb upstream 5.0kb upstream 5000 false chr3: 27530770-27535769 Medicago truncatula
Medtr3g466890 5.0kb downstream 5.0kb downstream 5486 true chr3: 27525284-27530769 Medicago truncatula
Medtr3g466890 5.0kb downstream 5.0kb downstream 5000 false chr3: 27525284-27530283 Medicago truncatula
Medtr3g466890 10.0kb upstream 10.0kb upstream 10486 true chr3: 27530284-27540769 Medicago truncatula
Medtr3g466890 10.0kb upstream 10.0kb upstream 10000 false chr3: 27530770-27540769 Medicago truncatula
Medtr3g466890 10.0kb downstream 10.0kb downstream 10486 true chr3: 27520284-27530769 Medicago truncatula
Medtr3g466890 10.0kb downstream 10.0kb downstream 10000 false chr3: 27520284-27530283 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315745 5265 Fabidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain