Gene : Medtr3g467000 M. truncatula Mt4.0v1
Defline:  (1 of 3) 2.1.1.148 - Thymidylate synthase (FAD) / Flavin dependent thymidylate synthase Description:  anthranilate synthase alpha 1
Genomic Order:  2955 Name:  ? Medtr3g467000
Secondary Identifier:  ? PAC:31061593
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6545 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g467000 0.5kb upstream 0.5kb upstream 5375 true chr3: 27607418-27612792 Medicago truncatula
Medtr3g467000 0.5kb upstream 0.5kb upstream 500 false chr3: 27612293-27612792 Medicago truncatula
Medtr3g467000 0.5kb downstream 0.5kb downstream 5375 true chr3: 27606918-27612292 Medicago truncatula
Medtr3g467000 0.5kb downstream 0.5kb downstream 500 false chr3: 27606918-27607417 Medicago truncatula
Medtr3g467000 1.0kb upstream 1.0kb upstream 5875 true chr3: 27607418-27613292 Medicago truncatula
Medtr3g467000 1.0kb upstream 1.0kb upstream 1000 false chr3: 27612293-27613292 Medicago truncatula
Medtr3g467000 1.0kb downstream 1.0kb downstream 5875 true chr3: 27606418-27612292 Medicago truncatula
Medtr3g467000 1.0kb downstream 1.0kb downstream 1000 false chr3: 27606418-27607417 Medicago truncatula
Medtr3g467000 2.0kb upstream 2.0kb upstream 6875 true chr3: 27607418-27614292 Medicago truncatula
Medtr3g467000 2.0kb upstream 2.0kb upstream 2000 false chr3: 27612293-27614292 Medicago truncatula
Medtr3g467000 2.0kb downstream 2.0kb downstream 6875 true chr3: 27605418-27612292 Medicago truncatula
Medtr3g467000 2.0kb downstream 2.0kb downstream 2000 false chr3: 27605418-27607417 Medicago truncatula
Medtr3g467000 5.0kb upstream 5.0kb upstream 9875 true chr3: 27607418-27617292 Medicago truncatula
Medtr3g467000 5.0kb upstream 5.0kb upstream 5000 false chr3: 27612293-27617292 Medicago truncatula
Medtr3g467000 5.0kb downstream 5.0kb downstream 9875 true chr3: 27602418-27612292 Medicago truncatula
Medtr3g467000 5.0kb downstream 5.0kb downstream 5000 false chr3: 27602418-27607417 Medicago truncatula
Medtr3g467000 10.0kb upstream 10.0kb upstream 14875 true chr3: 27607418-27622292 Medicago truncatula
Medtr3g467000 10.0kb upstream 10.0kb upstream 10000 false chr3: 27612293-27622292 Medicago truncatula
Medtr3g467000 10.0kb downstream 10.0kb downstream 14875 true chr3: 27597418-27612292 Medicago truncatula
Medtr3g467000 10.0kb downstream 10.0kb downstream 10000 false chr3: 27597418-27607417 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310045 5265 Fabidae View MSA
124064882 5270 Rosid View MSA
123744113 5271 Pentapetalae View MSA
122793457 5272 Eudicot View MSA
122041793 5273 Angiosperm View MSA
121344938 5274 Embryophyte View MSA
123424277 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.006     Low Low
cufflinks 0.032     Low High
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.033     Low High
cufflinks 0.021     Low  

0 Strain