Gene : Medtr3g491890 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR14136:SF11 - THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC Description:  thylakoid lumenal 17.4 kDa protein
Genomic Order:  4889 Name:  ? Medtr3g491890
Secondary Identifier:  ? PAC:31053298
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g491890 0.5kb upstream 0.5kb upstream 4677 true chr3: 41845986-41850662 Medicago truncatula
Medtr3g491890 0.5kb upstream 0.5kb upstream 500 false chr3: 41850163-41850662 Medicago truncatula
Medtr3g491890 0.5kb downstream 0.5kb downstream 4677 true chr3: 41845486-41850162 Medicago truncatula
Medtr3g491890 0.5kb downstream 0.5kb downstream 500 false chr3: 41845486-41845985 Medicago truncatula
Medtr3g491890 1.0kb upstream 1.0kb upstream 5177 true chr3: 41845986-41851162 Medicago truncatula
Medtr3g491890 1.0kb upstream 1.0kb upstream 1000 false chr3: 41850163-41851162 Medicago truncatula
Medtr3g491890 1.0kb downstream 1.0kb downstream 5177 true chr3: 41844986-41850162 Medicago truncatula
Medtr3g491890 1.0kb downstream 1.0kb downstream 1000 false chr3: 41844986-41845985 Medicago truncatula
Medtr3g491890 2.0kb upstream 2.0kb upstream 6177 true chr3: 41845986-41852162 Medicago truncatula
Medtr3g491890 2.0kb upstream 2.0kb upstream 2000 false chr3: 41850163-41852162 Medicago truncatula
Medtr3g491890 2.0kb downstream 2.0kb downstream 6177 true chr3: 41843986-41850162 Medicago truncatula
Medtr3g491890 2.0kb downstream 2.0kb downstream 2000 false chr3: 41843986-41845985 Medicago truncatula
Medtr3g491890 5.0kb upstream 5.0kb upstream 9177 true chr3: 41845986-41855162 Medicago truncatula
Medtr3g491890 5.0kb upstream 5.0kb upstream 5000 false chr3: 41850163-41855162 Medicago truncatula
Medtr3g491890 5.0kb downstream 5.0kb downstream 9177 true chr3: 41840986-41850162 Medicago truncatula
Medtr3g491890 5.0kb downstream 5.0kb downstream 5000 false chr3: 41840986-41845985 Medicago truncatula
Medtr3g491890 10.0kb upstream 10.0kb upstream 14177 true chr3: 41845986-41860162 Medicago truncatula
Medtr3g491890 10.0kb upstream 10.0kb upstream 10000 false chr3: 41850163-41860162 Medicago truncatula
Medtr3g491890 10.0kb downstream 10.0kb downstream 14177 true chr3: 41835986-41850162 Medicago truncatula
Medtr3g491890 10.0kb downstream 10.0kb downstream 10000 false chr3: 41835986-41845985 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302073 5265 Fabidae View MSA
124066927 5270 Rosid View MSA
123751077 5271 Pentapetalae View MSA
122794954 5272 Eudicot View MSA
122044610 5273 Angiosperm View MSA
121348286 5274 Embryophyte View MSA
123426937 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.071       Low
cufflinks 31.141     High  
cufflinks 38.253     High High
cufflinks 2.207        
cufflinks 29.218     High  
cufflinks 2.121        
cufflinks 1.562        
cufflinks 37.441     High High
cufflinks 1.206        

0 Strain