Gene : Medtr3g467550 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR24031:SF306 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 11 Description:  DEAD-box ATP-dependent RNA helicase
Genomic Order:  2991 Name:  ? Medtr3g467550
Secondary Identifier:  ? PAC:31056243
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g467550 0.5kb upstream 0.5kb upstream 10156 true chr3: 27857232-27867387 Medicago truncatula
Medtr3g467550 0.5kb upstream 0.5kb upstream 500 false chr3: 27857232-27857731 Medicago truncatula
Medtr3g467550 0.5kb downstream 0.5kb downstream 10156 true chr3: 27857732-27867887 Medicago truncatula
Medtr3g467550 0.5kb downstream 0.5kb downstream 500 false chr3: 27867388-27867887 Medicago truncatula
Medtr3g467550 1.0kb upstream 1.0kb upstream 10656 true chr3: 27856732-27867387 Medicago truncatula
Medtr3g467550 1.0kb upstream 1.0kb upstream 1000 false chr3: 27856732-27857731 Medicago truncatula
Medtr3g467550 1.0kb downstream 1.0kb downstream 10656 true chr3: 27857732-27868387 Medicago truncatula
Medtr3g467550 1.0kb downstream 1.0kb downstream 1000 false chr3: 27867388-27868387 Medicago truncatula
Medtr3g467550 2.0kb upstream 2.0kb upstream 11656 true chr3: 27855732-27867387 Medicago truncatula
Medtr3g467550 2.0kb upstream 2.0kb upstream 2000 false chr3: 27855732-27857731 Medicago truncatula
Medtr3g467550 2.0kb downstream 2.0kb downstream 11656 true chr3: 27857732-27869387 Medicago truncatula
Medtr3g467550 2.0kb downstream 2.0kb downstream 2000 false chr3: 27867388-27869387 Medicago truncatula
Medtr3g467550 5.0kb upstream 5.0kb upstream 14656 true chr3: 27852732-27867387 Medicago truncatula
Medtr3g467550 5.0kb upstream 5.0kb upstream 5000 false chr3: 27852732-27857731 Medicago truncatula
Medtr3g467550 5.0kb downstream 5.0kb downstream 14656 true chr3: 27857732-27872387 Medicago truncatula
Medtr3g467550 5.0kb downstream 5.0kb downstream 5000 false chr3: 27867388-27872387 Medicago truncatula
Medtr3g467550 10.0kb upstream 10.0kb upstream 19656 true chr3: 27847732-27867387 Medicago truncatula
Medtr3g467550 10.0kb upstream 10.0kb upstream 10000 false chr3: 27847732-27857731 Medicago truncatula
Medtr3g467550 10.0kb downstream 10.0kb downstream 19656 true chr3: 27857732-27877387 Medicago truncatula
Medtr3g467550 10.0kb downstream 10.0kb downstream 10000 false chr3: 27867388-27877387 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305486 5265 Fabidae View MSA
124070634 5270 Rosid View MSA
123742512 5271 Pentapetalae View MSA
122795346 5272 Eudicot View MSA
122048298 5273 Angiosperm View MSA
121348302 5274 Embryophyte View MSA
123425824 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.515       High
cufflinks 0.2        
cufflinks 0.207        
cufflinks 0.038     Low Low
cufflinks 0.51       High
cufflinks 0.047     Low Low
cufflinks 0.087        
cufflinks 0.227        
cufflinks 0.152        

0 Strain