Gene : Medtr4g022320 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF15227 - zinc finger of C3HC4-type, RING (zf-C3HC4_4) Description:  E3 ubiquitin-protein ligase PRT1-like protein, putative
Genomic Order:  970 Name:  ? Medtr4g022320
Secondary Identifier:  ? PAC:31114821
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g022320 0.5kb upstream 0.5kb upstream 7272 true chr4: 7382599-7389870 Medicago truncatula
Medtr4g022320 0.5kb upstream 0.5kb upstream 500 false chr4: 7389371-7389870 Medicago truncatula
Medtr4g022320 0.5kb downstream 0.5kb downstream 7272 true chr4: 7382099-7389370 Medicago truncatula
Medtr4g022320 0.5kb downstream 0.5kb downstream 500 false chr4: 7382099-7382598 Medicago truncatula
Medtr4g022320 1.0kb upstream 1.0kb upstream 7772 true chr4: 7382599-7390370 Medicago truncatula
Medtr4g022320 1.0kb upstream 1.0kb upstream 1000 false chr4: 7389371-7390370 Medicago truncatula
Medtr4g022320 1.0kb downstream 1.0kb downstream 7772 true chr4: 7381599-7389370 Medicago truncatula
Medtr4g022320 1.0kb downstream 1.0kb downstream 1000 false chr4: 7381599-7382598 Medicago truncatula
Medtr4g022320 2.0kb upstream 2.0kb upstream 8772 true chr4: 7382599-7391370 Medicago truncatula
Medtr4g022320 2.0kb upstream 2.0kb upstream 2000 false chr4: 7389371-7391370 Medicago truncatula
Medtr4g022320 2.0kb downstream 2.0kb downstream 8772 true chr4: 7380599-7389370 Medicago truncatula
Medtr4g022320 2.0kb downstream 2.0kb downstream 2000 false chr4: 7380599-7382598 Medicago truncatula
Medtr4g022320 5.0kb upstream 5.0kb upstream 11772 true chr4: 7382599-7394370 Medicago truncatula
Medtr4g022320 5.0kb upstream 5.0kb upstream 5000 false chr4: 7389371-7394370 Medicago truncatula
Medtr4g022320 5.0kb downstream 5.0kb downstream 11772 true chr4: 7377599-7389370 Medicago truncatula
Medtr4g022320 5.0kb downstream 5.0kb downstream 5000 false chr4: 7377599-7382598 Medicago truncatula
Medtr4g022320 10.0kb upstream 10.0kb upstream 16772 true chr4: 7382599-7399370 Medicago truncatula
Medtr4g022320 10.0kb upstream 10.0kb upstream 10000 false chr4: 7389371-7399370 Medicago truncatula
Medtr4g022320 10.0kb downstream 10.0kb downstream 16772 true chr4: 7372599-7389370 Medicago truncatula
Medtr4g022320 10.0kb downstream 10.0kb downstream 10000 false chr4: 7372599-7382598 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295606 5265 Fabidae View MSA
124060763 5270 Rosid View MSA
123743131 5271 Pentapetalae View MSA
122792219 5272 Eudicot View MSA
122046771 5273 Angiosperm View MSA
121351616 5274 Embryophyte View MSA
123427773 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.52        
cufflinks 0.419        
cufflinks 0.636        
cufflinks 0.201       Low
cufflinks 0.703       High
cufflinks 0.284       Low
cufflinks 0.567        
cufflinks 0.451        
cufflinks 0.35        

0 Strain