Gene : Medtr4g022800 M. truncatula Mt4.0v1
Defline:  (1 of 29) PTHR31896:SF12 - ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN-RELATED Description:  HXXXD-type acyl-transferase family protein
Genomic Order:  1001 Name:  ? Medtr4g022800
Secondary Identifier:  ? PAC:31108243
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-361 Medicago truncatula pathologic  
Mtruncatula PWY-6040 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g022800 0.5kb upstream 0.5kb upstream 2072 true chr4: 7636750-7638821 Medicago truncatula
Medtr4g022800 0.5kb upstream 0.5kb upstream 500 false chr4: 7638322-7638821 Medicago truncatula
Medtr4g022800 0.5kb downstream 0.5kb downstream 2072 true chr4: 7636250-7638321 Medicago truncatula
Medtr4g022800 0.5kb downstream 0.5kb downstream 500 false chr4: 7636250-7636749 Medicago truncatula
Medtr4g022800 1.0kb upstream 1.0kb upstream 2572 true chr4: 7636750-7639321 Medicago truncatula
Medtr4g022800 1.0kb upstream 1.0kb upstream 1000 false chr4: 7638322-7639321 Medicago truncatula
Medtr4g022800 1.0kb downstream 1.0kb downstream 2572 true chr4: 7635750-7638321 Medicago truncatula
Medtr4g022800 1.0kb downstream 1.0kb downstream 1000 false chr4: 7635750-7636749 Medicago truncatula
Medtr4g022800 2.0kb upstream 2.0kb upstream 3572 true chr4: 7636750-7640321 Medicago truncatula
Medtr4g022800 2.0kb upstream 2.0kb upstream 2000 false chr4: 7638322-7640321 Medicago truncatula
Medtr4g022800 2.0kb downstream 2.0kb downstream 3572 true chr4: 7634750-7638321 Medicago truncatula
Medtr4g022800 2.0kb downstream 2.0kb downstream 2000 false chr4: 7634750-7636749 Medicago truncatula
Medtr4g022800 5.0kb upstream 5.0kb upstream 6572 true chr4: 7636750-7643321 Medicago truncatula
Medtr4g022800 5.0kb upstream 5.0kb upstream 5000 false chr4: 7638322-7643321 Medicago truncatula
Medtr4g022800 5.0kb downstream 5.0kb downstream 6572 true chr4: 7631750-7638321 Medicago truncatula
Medtr4g022800 5.0kb downstream 5.0kb downstream 5000 false chr4: 7631750-7636749 Medicago truncatula
Medtr4g022800 10.0kb upstream 10.0kb upstream 11572 true chr4: 7636750-7648321 Medicago truncatula
Medtr4g022800 10.0kb upstream 10.0kb upstream 10000 false chr4: 7638322-7648321 Medicago truncatula
Medtr4g022800 10.0kb downstream 10.0kb downstream 11572 true chr4: 7626750-7638321 Medicago truncatula
Medtr4g022800 10.0kb downstream 10.0kb downstream 10000 false chr4: 7626750-7636749 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122289954 5265 Fabidae View MSA
124061050 5270 Rosid View MSA
123747860 5271 Pentapetalae View MSA
122791254 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.179       Low
cufflinks 7.363        
cufflinks 8.285        
cufflinks 1.273        
cufflinks 3.855        
cufflinks 0.459       Low
cufflinks 2.233        
cufflinks 13.577     High High
cufflinks 1.751        

0 Strain