Gene : Medtr4g023560 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12604:SF4 - X-RAY REPAIR CROSS-COMPLEMENTING PROTEIN 5 Description:  ATP-dependent DNA helicase 2 subunit Ku80
Genomic Order:  1054 Name:  ? Medtr4g023560
Secondary Identifier:  ? PAC:31107323
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g023560 0.5kb upstream 0.5kb upstream 7241 true chr4: 7972507-7979747 Medicago truncatula
Medtr4g023560 0.5kb upstream 0.5kb upstream 500 false chr4: 7972507-7973006 Medicago truncatula
Medtr4g023560 0.5kb downstream 0.5kb downstream 7241 true chr4: 7973007-7980247 Medicago truncatula
Medtr4g023560 0.5kb downstream 0.5kb downstream 500 false chr4: 7979748-7980247 Medicago truncatula
Medtr4g023560 1.0kb upstream 1.0kb upstream 7741 true chr4: 7972007-7979747 Medicago truncatula
Medtr4g023560 1.0kb upstream 1.0kb upstream 1000 false chr4: 7972007-7973006 Medicago truncatula
Medtr4g023560 1.0kb downstream 1.0kb downstream 7741 true chr4: 7973007-7980747 Medicago truncatula
Medtr4g023560 1.0kb downstream 1.0kb downstream 1000 false chr4: 7979748-7980747 Medicago truncatula
Medtr4g023560 2.0kb upstream 2.0kb upstream 8741 true chr4: 7971007-7979747 Medicago truncatula
Medtr4g023560 2.0kb upstream 2.0kb upstream 2000 false chr4: 7971007-7973006 Medicago truncatula
Medtr4g023560 2.0kb downstream 2.0kb downstream 8741 true chr4: 7973007-7981747 Medicago truncatula
Medtr4g023560 2.0kb downstream 2.0kb downstream 2000 false chr4: 7979748-7981747 Medicago truncatula
Medtr4g023560 5.0kb upstream 5.0kb upstream 11741 true chr4: 7968007-7979747 Medicago truncatula
Medtr4g023560 5.0kb upstream 5.0kb upstream 5000 false chr4: 7968007-7973006 Medicago truncatula
Medtr4g023560 5.0kb downstream 5.0kb downstream 11741 true chr4: 7973007-7984747 Medicago truncatula
Medtr4g023560 5.0kb downstream 5.0kb downstream 5000 false chr4: 7979748-7984747 Medicago truncatula
Medtr4g023560 10.0kb upstream 10.0kb upstream 16741 true chr4: 7963007-7979747 Medicago truncatula
Medtr4g023560 10.0kb upstream 10.0kb upstream 10000 false chr4: 7963007-7973006 Medicago truncatula
Medtr4g023560 10.0kb downstream 10.0kb downstream 16741 true chr4: 7973007-7989747 Medicago truncatula
Medtr4g023560 10.0kb downstream 10.0kb downstream 10000 false chr4: 7979748-7989747 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304837 5265 Fabidae View MSA
124065109 5270 Rosid View MSA
123746123 5271 Pentapetalae View MSA
122786375 5272 Eudicot View MSA
122050480 5273 Angiosperm View MSA
121345940 5274 Embryophyte View MSA
123427822 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.485        
cufflinks 3.195       High
cufflinks 1.759        
cufflinks 1.074       Low
cufflinks 1.432        
cufflinks 1.219       Low
cufflinks 2.569        
cufflinks 2.211        
cufflinks 2.494        

0 Strain