Gene : Medtr4g023510 M. truncatula Mt4.0v1
Defline:  (1 of 210) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Description:  PPR containing plant-like protein
Genomic Order:  1051 Name:  ? Medtr4g023510
Secondary Identifier:  ? PAC:31115158
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g023510 0.5kb upstream 0.5kb upstream 2631 true chr4: 7952834-7955464 Medicago truncatula
Medtr4g023510 0.5kb upstream 0.5kb upstream 500 false chr4: 7952834-7953333 Medicago truncatula
Medtr4g023510 0.5kb downstream 0.5kb downstream 2631 true chr4: 7953334-7955964 Medicago truncatula
Medtr4g023510 0.5kb downstream 0.5kb downstream 500 false chr4: 7955465-7955964 Medicago truncatula
Medtr4g023510 1.0kb upstream 1.0kb upstream 3131 true chr4: 7952334-7955464 Medicago truncatula
Medtr4g023510 1.0kb upstream 1.0kb upstream 1000 false chr4: 7952334-7953333 Medicago truncatula
Medtr4g023510 1.0kb downstream 1.0kb downstream 3131 true chr4: 7953334-7956464 Medicago truncatula
Medtr4g023510 1.0kb downstream 1.0kb downstream 1000 false chr4: 7955465-7956464 Medicago truncatula
Medtr4g023510 2.0kb upstream 2.0kb upstream 4131 true chr4: 7951334-7955464 Medicago truncatula
Medtr4g023510 2.0kb upstream 2.0kb upstream 2000 false chr4: 7951334-7953333 Medicago truncatula
Medtr4g023510 2.0kb downstream 2.0kb downstream 4131 true chr4: 7953334-7957464 Medicago truncatula
Medtr4g023510 2.0kb downstream 2.0kb downstream 2000 false chr4: 7955465-7957464 Medicago truncatula
Medtr4g023510 5.0kb upstream 5.0kb upstream 7131 true chr4: 7948334-7955464 Medicago truncatula
Medtr4g023510 5.0kb upstream 5.0kb upstream 5000 false chr4: 7948334-7953333 Medicago truncatula
Medtr4g023510 5.0kb downstream 5.0kb downstream 7131 true chr4: 7953334-7960464 Medicago truncatula
Medtr4g023510 5.0kb downstream 5.0kb downstream 5000 false chr4: 7955465-7960464 Medicago truncatula
Medtr4g023510 10.0kb upstream 10.0kb upstream 12131 true chr4: 7943334-7955464 Medicago truncatula
Medtr4g023510 10.0kb upstream 10.0kb upstream 10000 false chr4: 7943334-7953333 Medicago truncatula
Medtr4g023510 10.0kb downstream 10.0kb downstream 12131 true chr4: 7953334-7965464 Medicago truncatula
Medtr4g023510 10.0kb downstream 10.0kb downstream 10000 false chr4: 7955465-7965464 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027219 5273 Angiosperm View MSA
122302236 5265 Fabidae View MSA
124070657 5270 Rosid View MSA
123745654 5271 Pentapetalae View MSA
122794629 5272 Eudicot View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.615        
cufflinks 0.387        
cufflinks 0.625        
cufflinks 0.155       Low
cufflinks 1.54       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.597        
cufflinks 0.506        
cufflinks 0.519        

0 Strain