Gene : Medtr4g024920 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11735:SF12 - TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE, MITOCHONDRIAL-RELATED Description:  O-sialoglycoprotein endopeptidase, putative
Genomic Order:  1112 Name:  ? Medtr4g024920
Secondary Identifier:  ? PAC:31110021
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY0-1587 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g024920 0.5kb upstream 0.5kb upstream 9881 true chr4: 8450861-8460741 Medicago truncatula
Medtr4g024920 0.5kb upstream 0.5kb upstream 500 false chr4: 8460242-8460741 Medicago truncatula
Medtr4g024920 0.5kb downstream 0.5kb downstream 9881 true chr4: 8450361-8460241 Medicago truncatula
Medtr4g024920 0.5kb downstream 0.5kb downstream 500 false chr4: 8450361-8450860 Medicago truncatula
Medtr4g024920 1.0kb upstream 1.0kb upstream 10381 true chr4: 8450861-8461241 Medicago truncatula
Medtr4g024920 1.0kb upstream 1.0kb upstream 1000 false chr4: 8460242-8461241 Medicago truncatula
Medtr4g024920 1.0kb downstream 1.0kb downstream 10381 true chr4: 8449861-8460241 Medicago truncatula
Medtr4g024920 1.0kb downstream 1.0kb downstream 1000 false chr4: 8449861-8450860 Medicago truncatula
Medtr4g024920 2.0kb upstream 2.0kb upstream 11381 true chr4: 8450861-8462241 Medicago truncatula
Medtr4g024920 2.0kb upstream 2.0kb upstream 2000 false chr4: 8460242-8462241 Medicago truncatula
Medtr4g024920 2.0kb downstream 2.0kb downstream 11381 true chr4: 8448861-8460241 Medicago truncatula
Medtr4g024920 2.0kb downstream 2.0kb downstream 2000 false chr4: 8448861-8450860 Medicago truncatula
Medtr4g024920 5.0kb upstream 5.0kb upstream 14381 true chr4: 8450861-8465241 Medicago truncatula
Medtr4g024920 5.0kb upstream 5.0kb upstream 5000 false chr4: 8460242-8465241 Medicago truncatula
Medtr4g024920 5.0kb downstream 5.0kb downstream 14381 true chr4: 8445861-8460241 Medicago truncatula
Medtr4g024920 5.0kb downstream 5.0kb downstream 5000 false chr4: 8445861-8450860 Medicago truncatula
Medtr4g024920 10.0kb upstream 10.0kb upstream 19381 true chr4: 8450861-8470241 Medicago truncatula
Medtr4g024920 10.0kb upstream 10.0kb upstream 10000 false chr4: 8460242-8470241 Medicago truncatula
Medtr4g024920 10.0kb downstream 10.0kb downstream 19381 true chr4: 8440861-8460241 Medicago truncatula
Medtr4g024920 10.0kb downstream 10.0kb downstream 10000 false chr4: 8440861-8450860 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298994 5265 Fabidae View MSA
124066071 5270 Rosid View MSA
123747951 5271 Pentapetalae View MSA
122791458 5272 Eudicot View MSA
122043416 5273 Angiosperm View MSA
121345797 5274 Embryophyte View MSA
123425080 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.104        
cufflinks 0.525        
cufflinks 0.483        
cufflinks 0.047     Low Low
cufflinks 0.633       High
cufflinks 0.093     Low  
cufflinks 0.084        
cufflinks 0.533       High
cufflinks 0.096     Low  

0 Strain