Gene : Medtr4g022850 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13789//PTHR13789:SF227 - MONOOXYGENASE Description:  antheraxanthin epoxidase/zeaxanthin epoxidase
Genomic Order:  1004 Name:  ? Medtr4g022850
Secondary Identifier:  ? PAC:31109399
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g022850 0.5kb upstream 0.5kb upstream 5931 true chr4: 7665923-7671853 Medicago truncatula
Medtr4g022850 0.5kb upstream 0.5kb upstream 500 false chr4: 7671354-7671853 Medicago truncatula
Medtr4g022850 0.5kb downstream 0.5kb downstream 5931 true chr4: 7665423-7671353 Medicago truncatula
Medtr4g022850 0.5kb downstream 0.5kb downstream 500 false chr4: 7665423-7665922 Medicago truncatula
Medtr4g022850 1.0kb upstream 1.0kb upstream 6431 true chr4: 7665923-7672353 Medicago truncatula
Medtr4g022850 1.0kb upstream 1.0kb upstream 1000 false chr4: 7671354-7672353 Medicago truncatula
Medtr4g022850 1.0kb downstream 1.0kb downstream 6431 true chr4: 7664923-7671353 Medicago truncatula
Medtr4g022850 1.0kb downstream 1.0kb downstream 1000 false chr4: 7664923-7665922 Medicago truncatula
Medtr4g022850 2.0kb upstream 2.0kb upstream 7431 true chr4: 7665923-7673353 Medicago truncatula
Medtr4g022850 2.0kb upstream 2.0kb upstream 2000 false chr4: 7671354-7673353 Medicago truncatula
Medtr4g022850 2.0kb downstream 2.0kb downstream 7431 true chr4: 7663923-7671353 Medicago truncatula
Medtr4g022850 2.0kb downstream 2.0kb downstream 2000 false chr4: 7663923-7665922 Medicago truncatula
Medtr4g022850 5.0kb upstream 5.0kb upstream 10431 true chr4: 7665923-7676353 Medicago truncatula
Medtr4g022850 5.0kb upstream 5.0kb upstream 5000 false chr4: 7671354-7676353 Medicago truncatula
Medtr4g022850 5.0kb downstream 5.0kb downstream 10431 true chr4: 7660923-7671353 Medicago truncatula
Medtr4g022850 5.0kb downstream 5.0kb downstream 5000 false chr4: 7660923-7665922 Medicago truncatula
Medtr4g022850 10.0kb upstream 10.0kb upstream 15431 true chr4: 7665923-7681353 Medicago truncatula
Medtr4g022850 10.0kb upstream 10.0kb upstream 10000 false chr4: 7671354-7681353 Medicago truncatula
Medtr4g022850 10.0kb downstream 10.0kb downstream 15431 true chr4: 7655923-7671353 Medicago truncatula
Medtr4g022850 10.0kb downstream 10.0kb downstream 10000 false chr4: 7655923-7665922 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305594 5265 Fabidae View MSA
124070495 5270 Rosid View MSA
123752738 5271 Pentapetalae View MSA
122774763 5272 Eudicot View MSA
122051676 5273 Angiosperm View MSA
123429089 5275 Viridiplantae View MSA
121349162 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.199        
cufflinks 0.043     Low Low
cufflinks 0.052     Low  
cufflinks 0.085        
cufflinks 0.064     Low  
cufflinks 0.144        
cufflinks 0.284       High
cufflinks 0.038     Low Low
cufflinks 0.222       High

0 Strain