Gene : Medtr4g064160 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR31636:SF54 - SCARECROW-LIKE PROTEIN 14-RELATED Description:  GRAS family transcription factor
Genomic Order:  2858 Name:  ? Medtr4g064160
Secondary Identifier:  ? PAC:31109078
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g064160 0.5kb upstream 0.5kb upstream 3117 true chr4: 23915589-23918705 Medicago truncatula
Medtr4g064160 0.5kb upstream 0.5kb upstream 500 false chr4: 23918206-23918705 Medicago truncatula
Medtr4g064160 0.5kb downstream 0.5kb downstream 3117 true chr4: 23915089-23918205 Medicago truncatula
Medtr4g064160 0.5kb downstream 0.5kb downstream 500 false chr4: 23915089-23915588 Medicago truncatula
Medtr4g064160 1.0kb upstream 1.0kb upstream 3617 true chr4: 23915589-23919205 Medicago truncatula
Medtr4g064160 1.0kb upstream 1.0kb upstream 1000 false chr4: 23918206-23919205 Medicago truncatula
Medtr4g064160 1.0kb downstream 1.0kb downstream 3617 true chr4: 23914589-23918205 Medicago truncatula
Medtr4g064160 1.0kb downstream 1.0kb downstream 1000 false chr4: 23914589-23915588 Medicago truncatula
Medtr4g064160 2.0kb upstream 2.0kb upstream 4617 true chr4: 23915589-23920205 Medicago truncatula
Medtr4g064160 2.0kb upstream 2.0kb upstream 2000 false chr4: 23918206-23920205 Medicago truncatula
Medtr4g064160 2.0kb downstream 2.0kb downstream 4617 true chr4: 23913589-23918205 Medicago truncatula
Medtr4g064160 2.0kb downstream 2.0kb downstream 2000 false chr4: 23913589-23915588 Medicago truncatula
Medtr4g064160 5.0kb upstream 5.0kb upstream 7617 true chr4: 23915589-23923205 Medicago truncatula
Medtr4g064160 5.0kb upstream 5.0kb upstream 5000 false chr4: 23918206-23923205 Medicago truncatula
Medtr4g064160 5.0kb downstream 5.0kb downstream 7617 true chr4: 23910589-23918205 Medicago truncatula
Medtr4g064160 5.0kb downstream 5.0kb downstream 5000 false chr4: 23910589-23915588 Medicago truncatula
Medtr4g064160 10.0kb upstream 10.0kb upstream 12617 true chr4: 23915589-23928205 Medicago truncatula
Medtr4g064160 10.0kb upstream 10.0kb upstream 10000 false chr4: 23918206-23928205 Medicago truncatula
Medtr4g064160 10.0kb downstream 10.0kb downstream 12617 true chr4: 23905589-23918205 Medicago truncatula
Medtr4g064160 10.0kb downstream 10.0kb downstream 10000 false chr4: 23905589-23915588 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310548 5265 Fabidae View MSA
124064639 5270 Rosid View MSA
123750613 5271 Pentapetalae View MSA
122790030 5272 Eudicot View MSA
122048011 5273 Angiosperm View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.518        
cufflinks 5.866        
cufflinks 15.786     High High
cufflinks 0.654       Low
cufflinks 12.118     High High
cufflinks 1.478        
cufflinks 1.937        
cufflinks 10.168     High  
cufflinks 1.773        

0 Strain